Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme71619g00001 ATGACTATGATGCTCTACAATGAGGAAACCATTGGTAACAACAAGGTTGTTGAAGTTAAAAAGTTGGGAAAGAATAGACATAAGAGGATTAGCAGGTTGTGGTGTTGCTATAAGAGTGATAACATGTTCTTGGTCTATGAATATATTTCAAATGAGAGCTTGATGGATACATTGAATGGCAAGAAAAGCTTGTTAGATTGGAATTACAGTTATAGCTCATTCATTGTTATTGATGCTGCTGAGGGACTTGTTTATTTACATCATAATTGTGTCCTATCTATTGTTCATAAGCACATGAGGTCTAACAAAGTGCTTAGTGGAGTGTTTGAGGGAAAAGTAGCAGGTACTGGAGCTTCCAAAATGGTTCCCTTTGTAAGCAAAGTGGTAGTATTCATGTATGTTTCTATGGTCTATGTTACACTAGTGAAGAGGAGGAAAAGGAAAAAGTGGGATCCCGGCGGACATTTGGATAGGTATACATCAACTAGGTCCTCGCAGTGCAAGCAATGGGATCCGGGCAAAATTTGTGCTTGGAGCAATTTCCGTGAATGGGTGG 556 0.3921 MTMMLYNEETIGNNKVVEVKKLGKNRHKRISRLWCCYKSDNMFLVYEYISNESLMDTLNGKKSLLDWNYSYSSFIVIDAAEGLVYLHHNCVLSIVHKHMRSNKVLSGVFEGKVAGTGASKMVPFVSKVVVFMYVSMVYVTLVKRRKRKKWDPGGHLDRYTSTRSSQCKQWDPGKICAWSNFREWV 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme71619g00001 185 SUPERFAMILY Protein kinase-like (PK-like) 17 127 IPR011009 -
Trme71619g00001 185 Pfam Protein kinase domain 13 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme71619g00001 185 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme71619g00001 185 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 17 126 - -
Trme71619g00001 185 Gene3D Transferase(Phosphotransferase) domain 1 4 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme71619g00001 Trme-Chr71619 154 709 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme71619g00001 18 134 Receptor kinase-like Gene Family AT1G28440 45.000 2.93e-23 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trme71619g00001 Pkinase 8.8e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme71619g00001 - - qsu:112013224 102.834