Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme71503g00001 ATGCTAGGGAAAAAGATGGTATCATTGAAGAAACTTGCCAAGAAGGTGAAAGCTAGTGGTGGAGCTGACCCTAACACTAACCATGAATGTTTACTAAAGGGGTACCAAGAAGAGTTCTCCACAAGCACAACTCCAACTGGTTATTTTGCACTTTATGTAGGGGAAGAGCATCAGAGAAATGTGGTTCCAACAAGTTATCTTTCTCACCCTTTATTCAAGATGTTGCTAGAGAAATCATACAATGAATTTGGGTTTGAGCAGAGGAATGGCCTTGTAGTTCCATGTAGTGTTTCAACATTTCAAGAGGTTGTAAATGCTATTGAAT 325 0.3938 MLGKKMVSLKKLAKKVKASGGADPNTNHECLLKGYQEEFSTSTTPTGYFALYVGEEHQRNVVPTSYLSHPLFKMLLEKSYNEFGFEQRNGLVVPCSVSTFQEVVNAIE 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme71503g00001 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 103 IPR003676 GO:0009733
Trme71503g00001 108 Pfam Auxin responsive protein 24 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme71503g00001 Trme-Chr71503 97 421 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme71503g00001 45 108 Calmodulin-binding Proteins AT5G20810 53.125 1.22e-19 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme71503g00001 K14488 - qsa:O6P43_005959 159.073