Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme714523g00001 ATGATCATTAGAAGACTCAAACGCGTGAAATCTTTCATTGTACTAGATGATGTACATACTTCAGAACTTCTGCAAAACTTGATTGGAGTGGGACATGGCTGGCTAGGAGCTGGTAGCACGGTCATTGTGACAACAAGGGATAAGCATGTGTTGATAG 157 0.4204 MIIRRLKRVKSFIVLDDVHTSELLQNLIGVGHGWLGAGSTVIVTTRDKHVLI 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme714523g00001 52 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 51 IPR044974 GO:0006952
Trme714523g00001 52 Pfam NB-ARC domain 1 50 IPR002182 GO:0043531
Trme714523g00001 52 Gene3D - 1 52 IPR027417 -
Trme714523g00001 52 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 51 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme714523g00001 Trme-Chr714523 28 184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme714523g00001 5 51 WRKY Transcription Factor Family AT5G45050 36.170 7.57e-06 38.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme714523g00001 - - mtr:25501083 95.9005