Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme71445g00001 ATGAAAGCTGAGTATTTCCCACCAAAGGAAGATGTGATACTGCAAAATGAATCTCCTACAGATCTTTATGTGCTGGTTTCAGGAGCAGTGAATCTCGTTCACTACATTGATGGGAATGATCAAGTGGTTCTTGACAAGGCAACTGCAGTAGATACNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNGTTCGAACCACAGAGCTTTCTCAGATATTAAGACTCAACAGTACAACCTTAATGAATGCTTTACAAGCAAATCCAGGGGATGCACAGATTGTAATGGATAATCTTTCAATGAGATTAAGGGAACGTGAAGGACTCGTCTCTGAATATCCACACACAGATCTTGGATTGGTTCTGCAGAAACTGCTTCATGGAG 394 0.3629 MKAEYFPPKEDVILQNESPTDLYVLVSGAVNLVHYIDGNDQVVLDKATAVDTXXXXXXXXXXXXXXXVRTTELSQILRLNSTTLMNALQANPGDAQIVMDNLSMRLREREGLVSEYPHTDLGLVLQKLLHG 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme71445g00001 131 SUPERFAMILY cAMP-binding domain-like 1 111 IPR018490 -
Trme71445g00001 131 CDD CAP_ED 1 99 IPR000595 -
Trme71445g00001 131 Gene3D Jelly Rolls 1 115 IPR014710 -
Trme71445g00001 131 PANTHER POTASSIUM CHANNEL AKT1 1 110 IPR045319 GO:0005249|GO:0006813
Trme71445g00001 131 ProSiteProfiles cAMP/cGMP binding motif profile. 1 105 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme71445g00001 Trme-Chr71445 94 785 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme71445g00001 1 119 Ion Channels AT5G46240 47.899 2.77e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme71445g00001 K21867 - gmx:100783528 149.443