Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7125g00001 ATGTCTAAAGAAATGAAGTCCGAGCACAATCCATCAAATGTAGTAGCCAAATTAATGGGGCTTGAAACCCTTTCAAAGGGAGAGCCTAATTTATCTTTGATTAGAAGCCAAACAAAAGATTATTCTCAAGACATGTATGCTCATTTAGGATGGCCATTGAAACATTGGAAGGTGGAAGATAAGTTTATGATGGATAATAAGGAAATGCTTCTTGGAGTTCATCATCCAAGCACAGAACAGATTGGTCACAAAGATGGATATGAAACATGGCTGCAATCTCAGAGAGGAAGGTGGAGAGAAGATTTTGATGAGGGGAAGATGGCTCTTGTCCGTCAAAAATTCATTGAAGCAAAGTATATGTCGACAGATGAGACATTGCGTCAATCGAAGCAATTTGAAGATGCATTGGATATTTTAAGCTCAAACAATGATCTCTTAGTCAGGTTTTTGGATTCACAAAAGCTTTATCAACTTCCCTCTACTCCACTGGACGATTCAAACTGCATTACTCTTATCAAACCTTTGAAGATGTTTGGAAATGACAAACCTTCCGGAAAGGGTAGGAAGAATGATAGATTGATTAAGAAACCAGCAGATTCTGATCAAACGGCTGTATGGGAGAACATGAATCGTGGATACTCTCCAGAATCTACTCGAATAGTAGTATTGAAACCTAGTCCTGGAAGGACAAATGAACTTAAGGCTTTAGTTTCTCCAACAAATCCATCACCTCAAAGTTTCTATCAGGGAAATGCAAATGATAATGTACTTGAATCCATAAAAGTGGCTAAAGAGATTAGAATGCAAATGCAAGAAGGCCTAAGGAGCTATCAAAAGGATAAAACTTTATTACATTCTTCAGCATTTTCCAATGGCTATTCTAGTGATGATAGCTCATATAACAAATCATATCATGATTTGGAAGCTATGTCACCAATGCCAAGGCATTCATGGGATTGTATCAATGTATGTGGAAGTCCTTATTCTACGCAATCTATGGGTCGTGCAACATGTTCTCCAGAGTCATCGGTGTGCATAGAGGCAAAGAAACGGCTTTCTGAAAGATGGAATACAGTTACAGCTAAAGAAAAACATCATCCAGAACAAAGGCGTGTAGCGAGAAACTCTACCTTGGGTGAAATGCTTTCTCTTTCCCTTGTAAAGAAATCTGTAACATCTGCGGTTGAGAGTGCTAATAAACACCAAGAAGAACCAAGTAAATCCATTTCTTGCAGTCAATCTGTCAATGAAGAAATGAGCACTGATGATTCATCTCAAAATGTTTCTTTGGCAAATTTTGTTCCTGCATCGTCTATTGTCTATGAACCCGGCCTCGGCGTTGGTGCTAGCATAGAACATGACTCCAAGGTGGTCGCAAAGTCAAAGAGTAAGAAATCATCATTTAAAGGGAAAGTGGCAAGTTTCTTCTTTTCAATGAGTAAAAAATCAACCAAGAAAAAATCTAGTTCATCTCAATCTATAGATGAATCTGAAACCACTGTCACCGAAACATCGGTTCCATCAGTAAATTCACCTGGACATAATGTGTCTCAAAGCTCAAATGTTGG 1568 0.3839 MSKEMKSEHNPSNVVAKLMGLETLSKGEPNLSLIRSQTKDYSQDMYAHLGWPLKHWKVEDKFMMDNKEMLLGVHHPSTEQIGHKDGYETWLQSQRGRWREDFDEGKMALVRQKFIEAKYMSTDETLRQSKQFEDALDILSSNNDLLVRFLDSQKLYQLPSTPLDDSNCITLIKPLKMFGNDKPSGKGRKNDRLIKKPADSDQTAVWENMNRGYSPESTRIVVLKPSPGRTNELKALVSPTNPSPQSFYQGNANDNVLESIKVAKEIRMQMQEGLRSYQKDKTLLHSSAFSNGYSSDDSSYNKSYHDLEAMSPMPRHSWDCINVCGSPYSTQSMGRATCSPESSVCIEAKKRLSERWNTVTAKEKHHPEQRRVARNSTLGEMLSLSLVKKSVTSAVESANKHQEEPSKSISCSQSVNEEMSTDDSSQNVSLANFVPASSIVYEPGLGVGASIEHDSKVVAKSKSKKSSFKGKVASFFFSMSKKSTKKKSSSSQSIDESETTVTETSVPSVNSPGHNVSQSSNVG 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7125g00001 523 MobiDBLite consensus disorder prediction 395 426 - -
Trme7125g00001 523 MobiDBLite consensus disorder prediction 480 523 - -
Trme7125g00001 523 MobiDBLite consensus disorder prediction 493 523 - -
Trme7125g00001 523 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 518 - -
Trme7125g00001 523 Pfam Protein of unknown function (DUF3741) 111 152 IPR022212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7125g00001 Trme-Chr7125 352 1919 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7125g00001 1 492 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 37.753 1.92e-70 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7125g00001 - - vvo:131644516 703.36