Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme71246g00001 ATGGTTTTTCACACCAATGATATAATGGATGTGTCAAATGGTTTGAAAGAATATGAAGTTGTTTATTTGGCAGCACTTGTAGGAATGAATGTTGAGGAAAAGAATAGAATCATTGATCATTTGGCTAAGTACATGGCACCAGGAGCACTCCTCATGCTGAGGAGTGCTCATGGTGCTCGCGCTTTTCTATATCCGGTTGTTGATACTAATGATCTTGGAGGTTTTGAGGTTCTCTCAGTGTTTCATCCTACGGACGAGGTTATCAATTCGGTTGTCATAGCTCGCAAGTATCCAATGGTTTTATTACCAAATAAGTGTTGTTCTGATGAGGTTCAAGCCTTCAAACCTCTGAGCAACCATGGGAATAACATGATTGAGGAATTGGTCGTTGAAGAGAATTAA 402 0.398 MVFHTNDIMDVSNGLKEYEVVYLAALVGMNVEEKNRIIDHLAKYMAPGALLMLRSAHGARAFLYPVVDTNDLGGFEVLSVFHPTDEVINSVVIARKYPMVLLPNKCCSDEVQAFKPLSNHGNNMIEELVVEEN 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme71246g00001 133 PANTHER NICOTIANAMINE SYNTHASE 3 1 104 IPR004298 GO:0030410|GO:0030418
Trme71246g00001 133 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 101 IPR004298 GO:0030410|GO:0030418
Trme71246g00001 133 Pfam Nicotianamine synthase protein 1 98 IPR004298 GO:0030410|GO:0030418
Trme71246g00001 133 Gene3D Vaccinia Virus protein VP39 1 98 IPR029063 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme71246g00001 1 132 Nicotianamine Synthase Gene Family AT1G09240 57.971 2.16e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme71246g00001 K05953 - qsa:O6P43_011034 195.667