Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme71148g00001 ATGGCCCGAGAAAATGCCCCCTCTATCATATTTGTTGATGAAATAGATTCCCTATGTGGCCAGCGTGGAGAAGGCAATGAGAGTGAAGCTTCAAGACGAATCAAAACAGAACTTTTGGTGCAGATGCAG 129 0.4496 MARENAPSIIFVDEIDSLCGQRGEGNESEASRRIKTELLVQMQ 43
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme71148g00001 43 Gene3D - 1 43 IPR027417 -
Trme71148g00001 43 PANTHER AAA DOMAIN-CONTAINING 1 43 - -
Trme71148g00001 43 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 43 IPR027417 -
Trme71148g00001 43 Pfam ATPase family associated with various cellular activities (AAA) 2 43 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme71148g00001 Trme-Chr71148 478 606 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme71148g00001 2 42 Calmodulin-binding Proteins AT3G56690 54.762 3.64e-08 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme71148g00001 K12196 - zof:122041331 86.6557