Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7108g00001 ATGAATGTGCACCATATCACTAGCAAGAATTTCAGCAATTATGGGAAGGGACCTGATTTCCCTGAAATTTTTGAAGTTCTTGGTGCTAGTATTATAACTTTGGATTCAAATGAATGGAAACAAGAGAGAACACTACTTCATTCATTGCTCAAAAAGAAAAGTTTTGAGACAACCCTTCAAAAAAATGTTCAAAAGAAGCTACAAAATTGCCTATTACCATTTCTTGATCATCATGCATCAAAAAGTGTACAAGTACTTGATTTACAAGATATTTTTGAGAGGTTTACTTTTGATATTACTTGTACTTTTTTATTTGGATTTGATCCTAATAGCTTTCCATATAATTTCAATGAGTTCGCGGAGATTGCTTATGTAAATGCTATTTCTGTGCTTGAGGATACAATATTGTTTAGGCAATGTATACCAAAATGTTTTTGGAAGCTACAAAAATGGCTACAAATTGGTCAAGAGAAGAAAAACAAGGTAGCTTTGGAAAATCTTCACCAATTCTTGTTGAAGTGTATAATTTCTTCCAAAGGCAATGAAGAGAAAAGAAGATTGAGAAGTAGTGAAGATGTCGAAGAAATTGACTCTCTCGGCTTGCTACAAGGAGTAATGAACAAAGCCGAATTAGGAAAGGAGGAAATGGATCAATATGAGAAGTATATTAGAGACACCGCAATCACTCTCTTAGCCGCAGGAAATGGAACAATTAGTTCGGGTCTCAGTTGGTTCTTTTGGCTTGTTTCAACTCATCCTATTGTAGAAGCTAAAATCATTCAAGAGATTAAAGATAATTTACTAAAACTAAACGAGAATTTGATCGATAATTTAACAATGGAAAAGATTGATAAGCTAGTTTACCTACATGGAGTTATATGTGAAGCCTTGAGACTTTACCCTCCTATACCATTTGAGTACAAGTGTGCAGTGAAATCAGATATACTACCTAGTGGAGACCATGTTAGTCCAAATTTAAAGCTAGTATACTCTTTGTACGCAATGGGAAGGATGAAACAAATATGGGGCGAGGATTGCTTGGAATTTAAGCCGGAGAGATGGATATCAAATAGAGGACAAATTATACATGTACCGTCTTACAAGTTCATAACATTCAATGCAGGTCCAAGAAGTTGTTTAGGAAAAGATATTAGCTTTATACAAATGAAAATGGTTGCAGTTGCGGTCTTATGGAAGTTTCATGTTCAGGTGATGGAAGGTCACTCCATTACTCCAAGAGTTTCTATGATTCTTCGTATGGAACATGGATTTAAGGTCAATGTTAGTAAAAGATGCATTTGA 1302 0.3472 MNVHHITSKNFSNYGKGPDFPEIFEVLGASIITLDSNEWKQERTLLHSLLKKKSFETTLQKNVQKKLQNCLLPFLDHHASKSVQVLDLQDIFERFTFDITCTFLFGFDPNSFPYNFNEFAEIAYVNAISVLEDTILFRQCIPKCFWKLQKWLQIGQEKKNKVALENLHQFLLKCIISSKGNEEKRRLRSSEDVEEIDSLGLLQGVMNKAELGKEEMDQYEKYIRDTAITLLAAGNGTISSGLSWFFWLVSTHPIVEAKIIQEIKDNLLKLNENLIDNLTMEKIDKLVYLHGVICEALRLYPPIPFEYKCAVKSDILPSGDHVSPNLKLVYSLYAMGRMKQIWGEDCLEFKPERWISNRGQIIHVPSYKFITFNAGPRSCLGKDISFIQMKMVAVAVLWKFHVQVMEGHSITPRVSMILRMEHGFKVNVSKRCI 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7108g00001 433 Pfam Cytochrome P450 7 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7108g00001 433 Gene3D Cytochrome P450 1 432 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7108g00001 433 PRINTS E-class P450 group I signature 290 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7108g00001 433 PRINTS E-class P450 group I signature 222 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7108g00001 433 PRINTS E-class P450 group I signature 242 268 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7108g00001 433 PRINTS E-class P450 group I signature 379 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7108g00001 433 PRINTS E-class P450 group I signature 369 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7108g00001 433 CDD CYP86A 2 424 - -
Trme7108g00001 433 SUPERFAMILY Cytochrome P450 3 431 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7108g00001 433 PRINTS P450 superfamily signature 291 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7108g00001 433 PRINTS P450 superfamily signature 370 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7108g00001 433 PRINTS P450 superfamily signature 233 250 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7108g00001 433 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme7108g00001 433 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 372 381 IPR017972 GO:0005506|GO:0016705
Trme7108g00001 433 PANTHER CYTOCHROME P450 2 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7108g00001 Trme-Chr7108 267 1568 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7108g00001 2 433 Cytochrome P450 AT4G39490 43.537 5.68e-126 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7108g00001 - - cam:101494575 580.096