Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme70947g00001 ATGAAGCATGCTGTTTATGAAGATGTTAACATTCTTATGTGGATCATAATGTTGTTTTTCAGTGGTTACATGTCTCCAGAATATGCAATGCGTGGACAGTTCTCTGTGAAGTCAGATGTGTTTAGCTTCGGTGTCCTAGTTTTGGAAATTGTGAGTGGCAAGAAGAATACCGATTTAAATCATTGGAATAACGCTGATGACCTCTTAAGCTATGCATGGAAAAAATGGTCAGAGCAAACACCTTTGGAGTTACTGGATCCAACACTACGAG 271 0.3911 MKHAVYEDVNILMWIIMLFFSGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVSGKKNTDLNHWNNADDLLSYAWKKWSEQTPLELLDPTLR 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme70947g00001 90 Pfam Protein tyrosine and serine/threonine kinase 23 56 IPR001245 GO:0004672|GO:0006468
Trme70947g00001 90 SUPERFAMILY Protein kinase-like (PK-like) 14 87 IPR011009 -
Trme70947g00001 90 Gene3D Transferase(Phosphotransferase) domain 1 17 90 - -
Trme70947g00001 90 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme70947g00001 Trme-Chr70947 142 542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme70947g00001 22 90 Receptor kinase-like Gene Family AT3G45860 61.972 7.98e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme70947g00001 PK_Tyr_Ser-Thr 3.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme70947g00001 - - cam:101512516 131.724