Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme70928g00001 TGGATATGTCATGATTGGAGTGATGAGCACTGCTTGAAATTTTTGAAGAACTGTTATGAGGCACTTCCAGACAATGGAAAAGTGATTGTGGCAGAATGCATTCTTCCAGTGGCACCAGACACAAGCTTGGCAACAAAAGGTGTGGTTCACATTGATGTGATCATGTTGGCTCATAATCCAGGTGGGAAAGAGAGAACACAGAAAGAGTTTGAAGATCTTGCCAAAGGTGCTGGATTCAAAGGCTTCAAAGTTCACTGTTCTGCTTTCAACACATACATCATGGAATTTCTTAAGAAGGTTTAA 303 0.4092 WICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDTSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFKGFKVHCSAFNTYIMEFLKKV 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme70928g00001 100 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 96 IPR029063 -
Trme70928g00001 100 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 98 IPR016461 GO:0008168
Trme70928g00001 100 PANTHER O-METHYLTRANSFERASE 1 82 IPR016461 GO:0008168
Trme70928g00001 100 Pfam O-methyltransferase domain 1 80 IPR001077 GO:0008171
Trme70928g00001 100 Gene3D Vaccinia Virus protein VP39 1 100 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme70928g00001 Trme-Chr70928 342 644 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme70928g00001 1 100 Monolignol Biosynthesis Gene Families AT5G54160 74.000 1.15e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme70928g00001 K13066 - gmx:100777636 201.445