Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme70914g00001 CCTCCTCTTATGGATGAGGCTGAGAAGGTTGGGGGATCACAGAGTATAGGCCATTTTAGTTTCAGGAGTACAACTGGTAAAGGTGGCATAAAGAAAGAGGTTATCGATATGGCAAAGCTTCACAAGATGAAGCAAGAGAAAGTTTCCGCGTGGACCATGAAGATTTTGGTAGATGCAGTGATGAACTCAAGGCTGTCCACAATCTCTAATTCACTAGATGAAAGTTTTTATGATGTAAAAAATGAGCAAACTGATAAAGAAATTACTAATGAGATGGAAGCAACCGCTGCGGCCTATTATGTTTTCAGGAATGTTGCTGCTTCCCCTTGTTGCAAGTAA 339 0.41 PPLMDEAEKVGGSQSIGHFSFRSTTGKGGIKKEVIDMAKLHKMKQEKVSAWTMKILVDAVMNSRLSTISNSLDESFYDVKNEQTDKEITNEMEATAAAYYVFRNVAASPCCK 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme70914g00001 112 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 24 107 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme70914g00001 Trme-Chr70914 1 339 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme70914g00001 2 106 Mechanosensitive Ion Channel Family AT5G12080 63.208 9.66e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme70914g00001 K22048 - gmx:100777617 175.637