Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme70908g00001 ATGGCCAACCTCTCTAATGTGATAGAATTGGGTAAGAGTAGTGAAGAGAAAAAAACACAAGAATTAGAAGATGAAGAAAGTTTCTCATATGCTATGCAACTTTGCAACTCTAGTGTATTGCCAATGGCACTTCAATCTGCAGCTGAGCTAGGCGTTTTCGATGCGTTGCAAAAAGCCGGTAAAGGAGCTCAACTATCGGCCGAAGAGATTGCGGCCCATCTTTCATGTAACAATCCGGATGCTCCCAAAATGTTGGATCGCATTCTTGCTCTTCTTGCCTCACATGATGTGTTGAAGTGTTTGGTCTTTCAAGATCAACAAAAACTTGGATCCTTTCATAGACTTTATAGTATGGCTCCTGTTGCTAAATTCTTTGCTACTAATTCTGATGGTGTTTCATTAGGACCATTGTTGTCTTTCTTGCAAGATAAGGTTTTATTAGCTAGCTG 449 0.4031 MANLSNVIELGKSSEEKKTQELEDEESFSYAMQLCNSSVLPMALQSAAELGVFDALQKAGKGAQLSAEEIAAHLSCNNPDAPKMLDRILALLASHDVLKCLVFQDQQKLGSFHRLYSMAPVAKFFATNSDGVSLGPLLSFLQDKVLLAS 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme70908g00001 149 PANTHER O-METHYLTRANSFERASE 31 147 IPR016461 GO:0008168
Trme70908g00001 149 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 149 IPR016461 GO:0008168
Trme70908g00001 149 SUPERFAMILY "Winged helix" DNA-binding domain 23 128 IPR036390 -
Trme70908g00001 149 Gene3D - 10 125 IPR036388 -
Trme70908g00001 149 FunFam Caffeic acid 3-O-methyltransferase 11 125 - -
Trme70908g00001 149 Pfam Dimerisation domain 42 93 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme70908g00001 Trme-Chr70908 121 569 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme70908g00001 10 149 Monolignol Biosynthesis Gene Families AT5G54160 43.357 4.64e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme70908g00001 K13066 - tpra:123922925 209.534