Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme70886g00001 GAAAGTAATGTGTTAGAAGTGATTAAAAGTGATTATGAGAGTGATATTGAGGAAGCTGTGAAAAATGGCTACCTTAAAACAGATTCAGATTTCTTAAAAGAGGATCTTAATGGTGGCTCTTGCTGTGTTACAACATTGATTAGGAATGGTAATCTTATTGTGTCTAATGCCGGCGATTGTCGTGCTGTCATTAGTAGAGGAGGTGTTGCTGAGGCATTAACATCTGATCATAAACCTTCAAGGATAGATGAAAAGGAAAGGATTGAAACTCAGGGCGGTTATGTTGATATGTGCCGCGGTGTTTGGAGAATCCAAGGATCTCTTGCTGTTTCAAGGAGCATTGGAGATAGACACATGAAACAATATGTGATAGCAGAACCTGAGACCAAAGTTGTTAAAATTGAATCTCATCATGACTTGTTAATCTTAGCTTCAGATGGATTATGGGAAAAGGTATAG 459 0.3813 ESNVLEVIKSDYESDIEEAVKNGYLKTDSDFLKEDLNGGSCCVTTLIRNGNLIVSNAGDCRAVISRGGVAEALTSDHKPSRIDEKERIETQGGYVDMCRGVWRIQGSLAVSRSIGDRHMKQYVIAEPETKVVKIESHHDLLILASDGLWEKV 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme70886g00001 152 Pfam Protein phosphatase 2C 4 152 IPR001932 -
Trme70886g00001 152 ProSiteProfiles PPM-type phosphatase domain profile. 1 152 IPR001932 -
Trme70886g00001 152 SMART PP2C_4 1 152 IPR001932 -
Trme70886g00001 152 CDD PP2Cc 5 152 IPR001932 -
Trme70886g00001 152 SUPERFAMILY PP2C-like 9 151 IPR036457 -
Trme70886g00001 152 Gene3D - 2 152 IPR036457 -
Trme70886g00001 152 PANTHER PROTEIN PHOSPHATASE 2C 16 151 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme70886g00001 Trme-Chr70886 3 662 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme70886g00001 4 152 PP2C-type Phosphatase Gene Family AT2G30020 69.333 8.81e-70 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme70886g00001 K17506 - gmx:100818903 258.84