Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme70759g00001 ATGTCGGTGGTGGTGATCCGGCGGCGACGGAGGAGGTTGAATGATGGGGAAAGGGGATTTGAGAAGGGGAAGATGGAAGGTGAGGTTTTGGGTTGTGGGGAGGAGCAGAAGGGTAGGTTTGTGGTGGTGGATGAAGGATTTGGGTTTGAATTGGAGGATTTGTTGAGGGCTTCTGCTTATGTGGTTGGGAAGAGTAGGAGTGGGATTGTTTATAAGGTTGTTGGTGGCGGAAAAGGGTCGGTTCCGGCGGCGACCGCGGTGGCTGTTCGGCGGTTAAGTGAGGGTGATGATGGAGGTTTAAGGTTCAAGGATTTTGAGTATGAGGTGGAAGCTATTGGAAGGGTAAGACATCCTAATGTTGTGCCTTTGAGAGCTTATTACTATGCTAGTGATGAGAAGCTTCTAATCACTGATTTCATTCGCAATGGAAGCTTGCATACTGCTTTGCATGGTATCATTTCTCACACTTTGGTTCTTACTTTGTTAAATTAA 492 0.4736 MSVVVIRRRRRRLNDGERGFEKGKMEGEVLGCGEEQKGRFVVVDEGFGFELEDLLRASAYVVGKSRSGIVYKVVGGGKGSVPAATAVAVRRLSEGDDGGLRFKDFEYEVEAIGRVRHPNVVPLRAYYYASDEKLLITDFIRNGSLHTALHGIISHTLVLTLLN 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme70759g00001 163 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 151 IPR046959 -
Trme70759g00001 163 ProSiteProfiles Protein kinase domain profile. 56 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme70759g00001 163 SUPERFAMILY Protein kinase-like (PK-like) 61 153 IPR011009 -
Trme70759g00001 163 Pfam Protein tyrosine and serine/threonine kinase 63 150 IPR001245 GO:0004672|GO:0006468
Trme70759g00001 163 Gene3D Phosphorylase Kinase; domain 1 36 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme70759g00001 Trme-Chr70759 14 505 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme70759g00001 34 157 Receptor kinase-like Gene Family AT3G57830 71.318 9.11e-53 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trme70759g00001 PK_Tyr_Ser-Thr 1.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme70759g00001 - - vvo:131595630 241.506