Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme70716g00001 TTTGATTATCCTCAGCCAACATTTCAGAAATTGATGAAAGAGCACTGCATGGAACCTTTTTTCGTATTTCAGGTTTTCTGTGTTGGTCTCTGGTGTTTGGATGAATATTGGTACTATAGTTTGTTTACTCTATTTATGCTGTTTATGTTTGAGTCAACCATGGCAAAAAGTCGGTTGAGGACTCTGACTGAGTTAAGACGTGTTAGAGTGGATAATCAGATCGTAATGGTTCATCGTTGTGGCAAGTGGGTAAAAATCTCTGGTACAGACCTTTTGCCTGGAGATGTTGTCTCTATAGGCCGCTCTTCTGGTCAGAATGGAGAGGAAAAATCTGTACCTGCAGACATGCTTATTTTGGCTGGAAGTGCAATTGTGAATGAAGCTATTCTCACAGGCGAGTCTACTCCTCAATGGAAG 417 0.4101 FDYPQPTFQKLMKEHCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLRTLTELRRVRVDNQIVMVHRCGKWVKISGTDLLPGDVVSIGRSSGQNGEEKSVPADMLILAGSAIVNEAILTGESTPQWK 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme70716g00001 139 PANTHER CATION-TRANSPORTING ATPASE-RELATED 1 139 IPR006544 GO:0006812|GO:0016020|GO:0019829|GO:0140358
Trme70716g00001 139 Gene3D - 39 139 - -
Trme70716g00001 139 Pfam E1-E2 ATPase 74 139 - -
Trme70716g00001 139 SUPERFAMILY Calcium ATPase, transduction domain A 73 139 IPR008250 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme70716g00001 1 139 Primary Pumps ATPases AT5G23630 85.714 8.68e-81 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme70716g00001 K14950 - gmx:100807022 277.715