Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme70652g00001 ATGGCTTCTTCACCAACTGACTCCAATCCACCATCCGCCGTTCCTCTCCCTCTCTCGTTACCTGCTCCACCACCACCAACAACCTCTTCCCGCCGTCTTCCTCCTCCTTGCTGGACACCTGAAGAAACATCTGCCTTAATCGATTCGTATCGTGACAAATGGTATTCTCTTGGCCGTACAAATCTCAAAGCAATTCATTGGCAAGAAGTTGCTGACGCCGTTACCGCTAAGTGCCCTAACGCTTCACCGACACACAAAACCGCCGTTCAGTGCCGTCATAAAATGGAAAAATTACGTAAACGTTACCGATCTGAGATCCAACGGCTTAGATCTCTTCCTGTTCCGAGATCTCGTTCTTCTTCTTCTTGGGTTCATTTTAAATCTATGGATTCTATGGAAAAAGGTCCTTCTCCTCCTTCTCCACCACCGATGAAAATTGAAAACCCTAATCATCTTAATCACCGTGAAACCCTAGATGATAACGATGATCTTGACGATGATGATCTTTATGAGGAACTCAGAAGTGCTGCTGGTGGTGGATCTGGAAACAG 551 0.4628 MASSPTDSNPPSAVPLPLSLPAPPPPTTSSRRLPPPCWTPEETSALIDSYRDKWYSLGRTNLKAIHWQEVADAVTAKCPNASPTHKTAVQCRHKMEKLRKRYRSEIQRLRSLPVPRSRSSSSWVHFKSMDSMEKGPSPPSPPPMKIENPNHLNHRETLDDNDDLDDDDLYEELRSAAGGGSGN 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme70652g00001 183 FunFam Trihelix transcription factor ASIL2 38 104 - -
Trme70652g00001 183 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 12 166 IPR044823 -
Trme70652g00001 183 MobiDBLite consensus disorder prediction 109 166 - -
Trme70652g00001 183 MobiDBLite consensus disorder prediction 1 38 - -
Trme70652g00001 183 Gene3D - 38 104 - -
Trme70652g00001 183 Pfam Myb/SANT-like DNA-binding domain 36 132 IPR044822 -
Trme70652g00001 183 MobiDBLite consensus disorder prediction 10 33 - -
Trme70652g00001 183 Coils Coil 92 112 - -
Trme70652g00001 183 MobiDBLite consensus disorder prediction 113 127 - -
Trme70652g00001 183 SMART 118neu2 45 137 IPR006578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme70652g00001 Trme-Chr70652 1 551 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme70652g00001 37 132 Trihelix Transcription Factor Family AT3G14180 31.250 1.74e-14 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trme70652g00001 Myb_DNA-bind_4 1.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme70652g00001 - - mtr:11426900 232.261