Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7061g00001 GCAGCAGAGCTTATGTTCGACAATTATAAAGCACCTGCATTAGTTTTGGCAAACAATGATGTAAGCGAGAAGTCAACCATTATCCTATATCTTTTGCATCAGGGGATGCCATGTCATTATTTGTTGATAGGAGTTTTGAAAAAGCGTTACGGTCCTGAAGCAGATGTTTGGAGTGTTGGTGTTATCCTTTACATTCTTTTGAGTGGAGTACCTCCATTTTGGGCTGGTGATTCCAATTTTGAGCTGCCTGAGATAAAGCTAAGTGTTGGATTTTTCAAGAGGTTCAGTTCTAAATCAAGTGAGATGTTGTGTGCTGCAGATTGA 324 0.3981 AAELMFDNYKAPALVLANNDVSEKSTIILYLLHQGMPCHYLLIGVLKKRYGPEADVWSVGVILYILLSGVPPFWAGDSNFELPEIKLSVGFFKRFSSKSSEMLCAAD 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7061g00001 107 SUPERFAMILY Protein kinase-like (PK-like) 46 89 IPR011009 -
Trme7061g00001 107 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme7061g00001 107 Gene3D Transferase(Phosphotransferase) domain 1 7 103 - -
Trme7061g00001 107 PANTHER SERINE/THREONINE-PROTEIN KINASE 45 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7061g00001 Trme-Chr7061 549 1611 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7061g00001 35 75 EF-hand Containing Proteins AT5G04870 75.610 6.07e-16 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme7061g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7061g00001 K13412 - sspl:121751715 69.707