Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme70572g00001 ATGGACGAAAGAGAATCTCTTGAACTTCTCAGTTGGCATGCATTCAAGCAACCAAGTCCAATAGAAGATTTTGCTACACATTCAACAGACGTGATTGCTTATTCTGGGAGATTGCCATTAGCACTTCAAGTCCTAGGATTTTTTGCTGATATTGGAATTAAAGTACTTGTAGAGAGAAGCCTTGTAACTGTTGACAATAGGAACAAGCTTAGAATGCATGATATGTTAAGAGACATGGGAAGACAAATAATTTATGATGAATCACCATTTGATGCTGAGAGACGCAGTAGATTGTGGCGCCGTGAGGAAGTGTTTGATATATTATCAAAGAATAAG 336 0.378 MDERESLELLSWHAFKQPSPIEDFATHSTDVIAYSGRLPLALQVLGFFADIGIKVLVERSLVTVDNRNKLRMHDMLRDMGRQIIYDESPFDAERRSRLWRREEVFDILSKNK 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme70572g00001 112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 46 IPR027417 -
Trme70572g00001 112 SUPERFAMILY "Winged helix" DNA-binding domain 49 108 IPR036390 -
Trme70572g00001 112 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 50 107 IPR044974 GO:0006952
Trme70572g00001 112 Gene3D - 1 50 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme70572g00001 Trme-Chr70572 22 505 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme70572g00001 42 99 WRKY Transcription Factor Family AT5G45050 53.448 2.34e-13 63.2