Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme70546g00001 ATGGAAGGATTACAAAGACGGAGTATTGCTCCACCACATGAAGGGTTGGAATTGGGAATCGGAGAACCTACCATTCTTGAGGTGGTCGCCGACGCTTATGATACCGCTTTGAATCGCATCAAGGAGTGGAATAAG 135 0.4741 MEGLQRRSIAPPHEGLELGIGEPTILEVVADAYDTALNRIKEWNK 45
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme70546g00001 45 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 7 44 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme70546g00001 Trme-Chr70546 322 536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme70546g00001 4 44 Core DNA Replication Machinery Family AT1G08130 43.902 2.43e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme70546g00001 K10747 - twl:119990947 46.595