Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme70538g00001 ATGTATAGGAAGATATATAGCGGAGAATTTAAGTGTCCACGGTGGTTTTCACCGGATCTACGGCGGTTTTTATCACGGTTGTTGGATACGAAACCTGAGACGAGGATAACCGTTGAGGAGATTTTAAGGGATCCTTGGTTTAGAAAAGGGTATAAGGAGGTGAAGTTACATGAAGAGGGGGTTGAACTTGGGGAGAAGGTTAACGGGGAAGAAGAAAGTAAAACAATGGATTTGAATGCGTTTGATATTATATCATTTTTCTCTTCAGGGTTGGATCTTTCAGGGTTGTTTATGGATATGGAAGGGGAGAGATTCGTGTTGACGGAGTCGTTGGAGAAGGTTGTTGAGAAGGTGGTGGCGGCAGCAAAGGCGGAGGGGTTAGTGGTGAGAAAGAAGAAGGAATTTGGGGTGGAGATTGAGACCCAAAACGGGGGTTTGGTCATTGGGGTTGAGGTTTACCGATTATTGGCTGAGGTGGTTGTGGTCGAGGTGAAGAGGTTTGGTGGGGACGAGGTTGCTTTTGATGAAGTGTGGAAGAATAAGTTGAGACCCCACTTGTGTGATGCAACGACGTCGCGACAAGACCAAACTCAGTCTCATGCGGCTGTCTCTGCTGAATAA 621 0.4622 MYRKIYSGEFKCPRWFSPDLRRFLSRLLDTKPETRITVEEILRDPWFRKGYKEVKLHEEGVELGEKVNGEEESKTMDLNAFDIISFFSSGLDLSGLFMDMEGERFVLTESLEKVVEKVVAAAKAEGLVVRKKKEFGVEIETQNGGLVIGVEVYRLLAEVVVVEVKRFGGDEVAFDEVWKNKLRPHLCDATTSRQDQTQSHAAVSAE 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme70538g00001 206 CDD CIPK_C 79 187 - -
Trme70538g00001 206 ProSiteProfiles NAF domain profile. 73 98 IPR018451 GO:0007165
Trme70538g00001 206 SUPERFAMILY Protein kinase-like (PK-like) 2 53 IPR011009 -
Trme70538g00001 206 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 1 173 - -
Trme70538g00001 206 Gene3D Transferase(Phosphotransferase) domain 1 1 75 - -
Trme70538g00001 206 Pfam NAF domain 78 131 IPR004041 GO:0007165
Trme70538g00001 206 Gene3D Kinase associated domain 1, KA1 76 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme70538g00001 Trme-Chr70538 162 782 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme70538g00001 1 192 CBL-interacting serine-threonine protein kinases AT2G30360 50.739 4.24e-56 182