Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7051g00001 ATGACGACGACGGATACAACATCACGCGGTTCAACTTCATCCTCCAATGGACTCCTCACCGTCACCATTGCCAGCAGCACTCACCCTCACGGCCTCTCTGCTAACGAGGATGACGACGACCTCCTCGTTGATCCCGACGATCCTTTCAATATTACTCAAACCAAGAATGCTCCTCACCAAACCCTCAAGCGTTGGCGACAAGCAGCATTTGTGCTCAATGCGTCCAGGCGTTTTAGATATACTCTCGACTTGAAAAAGGAAGAGGAGAAAGAGCAAAAGAAAAGCATGATCAGAGCTCATGCACTAGTCATCAGAGCAGCTTTGCTTTTCAGATTGGCCGGTGAACGCGAACTAGTAACAAGAAGTACATCAGTGGCACCCACAACTCCAGGTGGTGACTATGCAGTTGGACTCGAACAACTTGTTTCAATGTCCAAGAATCAAAATATTTCTGCTTTACAACAATATGGAGGGGTTAAAGGCTTATCAGATTTTCTAAAATCAGATCTGGATAAAGGGATTAGTGGAGATGACGTTGATCTATCAAGGAGGAAAAGTGCATTTGGAACTAATACATATCCTCGGAAAAAGGGTAGAAGTTTATGGAGGTTTCTATGGGAAGCTTGGCAAGATCTGACCCTTATAATATTGATTATAGCAGCTGCAGTATCATTAGTGCTTGGAATAAAAACAGAG 696 0.4411 MTTTDTTSRGSTSSSNGLLTVTIASSTHPHGLSANEDDDDLLVDPDDPFNITQTKNAPHQTLKRWRQAAFVLNASRRFRYTLDLKKEEEKEQKKSMIRAHALVIRAALLFRLAGERELVTRSTSVAPTTPGGDYAVGLEQLVSMSKNQNISALQQYGGVKGLSDFLKSDLDKGISGDDVDLSRRKSAFGTNTYPRKKGRSLWRFLWEAWQDLTLIILIIAAAVSLVLGIKTE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7051g00001 232 Pfam Cation transporter/ATPase, N-terminus 157 224 IPR004014 -
Trme7051g00001 232 Pfam Ca2+-ATPase N terminal autoinhibitory domain 46 89 IPR024750 GO:0005516
Trme7051g00001 232 SUPERFAMILY Calcium ATPase, transmembrane domain M 156 228 IPR023298 -
Trme7051g00001 232 Gene3D - 59 111 - -
Trme7051g00001 232 SMART Cation_ATPase_N_a_2 155 229 IPR004014 -
Trme7051g00001 232 PANTHER CATION TRANSPORTING ATPASE 98 232 - -
Trme7051g00001 232 MobiDBLite consensus disorder prediction 28 47 - -
Trme7051g00001 232 FunFam Calcium-transporting ATPase 57 113 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme7051g00001 11 232 Primary Pumps ATPases AT3G21180 59.649 2.74e-82 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7051g00001 K01537 - gmx:100802659 332.798