Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme70355g00001 GGATACAAGAGATTTTTCAAGAGAATATCACTAGAGACATCAGATTACCTTAAAGATGACTGCCTTAGTGTTAATTGTAGCGTTGGTGTCGTGAGGTCACACACAGAGGGCCCTAAAACATTTTCAATTGCAATACCACCTTCTACTATTGGTCACCAGTTCGGGAAGCTACTGGAAAGTGGAAAGGACAGTGATGTGAGTTTTGAAGTGAATGGTGAAATTTTTGCAGCTCATAAATTGGTACTAGCAGCTCGATCAGCTGTTTTTAGAGCTCAGCTTTTTGGTCCTATGAAAGATAAGAATACAC 307 0.4007 GYKRFFKRISLETSDYLKDDCLSVNCSVGVVRSHTEGPKTFSIAIPPSTIGHQFGKLLESGKDSDVSFEVNGEIFAAHKLVLAARSAVFRAQLFGPMKDKNT 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme70355g00001 102 SUPERFAMILY POZ domain 41 101 IPR011333 -
Trme70355g00001 102 SUPERFAMILY TRAF domain-like 1 30 - -
Trme70355g00001 102 ProSiteProfiles MATH/TRAF domain profile. 1 28 IPR002083 GO:0005515
Trme70355g00001 102 CDD MATH 1 28 IPR002083 GO:0005515
Trme70355g00001 102 Gene3D Potassium Channel Kv1.1; Chain A 31 102 IPR011333 -
Trme70355g00001 102 Pfam BTB/POZ domain 55 101 IPR000210 GO:0005515
Trme70355g00001 102 ProSiteProfiles BTB domain profile. 64 102 IPR000210 GO:0005515
Trme70355g00001 102 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 1 96 IPR045005 GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme70355g00001 Trme-Chr70355 1 307 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trme70355g00001 BTB 5.1e-10 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme70355g00001 K10523 - qsa:O6P43_007074 184.882