Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme702g00001 ATGAGAAAGAATTGCACTTCTTTACAAGAGAAATTGATAAAGGAAGAAGCAGAGAAGTCGGCTGCAGTGGAATCTCTTGTTAAAGAGCGAGAGGCAAGGCTTGATATTGAAAGGTCACATACCACTCTTTCCGAGGACCTCGGAAGAACTGAACGAGAGATTCAAAGTGCAAATCAGAAGATATCATCACTGAATGAAATGTATAAGCGGTTACAAGAATACATAACAAGTTTACAACAGTACAATGGAAAACTTCATACAGAGCTTTCATCAGTTGAAGATGAACTCAAACGTGTAGAGAAAGAGAAAGCTACTGCAGCGGAGAATATCGCCATGTTAAGGGGTCAACTTACTTTATCTATTTCTTCTCAAGAAGAGGCCACAAAGCAGAAGGATGATCTTGCTAGTGAAGTTTATTCTATGAGAGGAGAGTTGAAACAAGTAAGAGATGATAGAGACTGTCAATTATCTCGCGCGCAAACTTTAAATGCTGATTTGATGAAATTAAAAGAATCTAGGGAAAACTCTTCCATTGAATTGGACAGCTTGACTTTAAAAGCAAATGAACTGAAGGAAAAAACTTCTTTGAAAGAGAATCAAATAAAGGCATTGCAAGAAAAGTTAGCAGCTGCAGAGAAGAAATTGCAGGTGACTGATATATCTGTATTTGAGACAAGAACAGAATTTGAAGGGCAAAAAAAATTTGTTGATGAGTTGCAAAGACGCTTGGAAGACACAGAATTTAAACTTATAGAAGGGGAGAGGCTGCGGAAAAAATTACACAATACCATTTTAGAGTTAAAAGGGAACATCCGCGTATTCTGTCGGGTGAGGCCTTTGTTGTCCGATGAAAGTCGCAGCACAGAAGGCAAGATATTCAGTTATCCAACATCGATGGAAGCTTCTGGACGAGGAATTGATCTATCCCAAAATGGCCAGAAACATTCTTTTACATTTGATAAAGTTTTTATACAAGATGTATCACAAGAAGAAATTTTTGTCGAAGTTTCACAGCTTGTACAAAGTGCTCTTGATGGTTATAAGGTCTGCATCTTTGCCTATGGTCAAACAGGATCAGGGAAAACCTATACAATGATGGGAAAACCTGGACATCCAGACGAAAAAGGGTTGATACCTCGTTCGTTAGAACAAATATTCCAAACGAAACAGTCTCAGCAACCTCAAGGCTGGAAATACGAGATGCAGGTGTCCATGTTAGAAATATACAATGAAACCATTCGTGATCTGCTATCTACAAACAGATCATCGTATGATGCAACACGCCTTGAAAATGGTACTCCTGGAAAGCAATATACAATCAAACATGATGCAAATGGAAATACACAAGTTTCTGATCTTACAGTAGTAGATGTTCACAGTGCGAAAGAAGTCGCGTTTCTTTTAAATCAAGCTGCAAATAGCAGATCTGTGGGAAAAACTCAGATGAATGAACAATCATCAAGAAGTCATTTTGTGTTCACTCTTCGAATATATGGTGTGAATGAGAGCACTGACCAACAAGTACAAGGTGTTCTGAATCTAATTGACCTTGCTGGTAGCGAGCGTCTTTCAAAGAGTGGTTCAACCGGTGACCGGTTGAAAGAAACTCAAGCAATCAACAAAAGCTTGTCATCATTGAGTGATGTCATATTTGCCTTGGCCAAGAAGGAAGATCATGTGCCATTCAGAAACTCAAAGCTTACATATCTACTTCAACCTTGTCTGGGTGGAGACTCGAAGACGTTAATGTTTGTAAACATTTCACCTGACCCTTCTTCAGTTGGCGAGTCACTATGCTCACTCCGGTTTGCTTCGAGAGTAAATGCTTGTGAGATTGGAACACCTCGTCGTCAGACCAATGGCCGCGCTACAGACTCTCGTTTGAGATATTGCTGA 1896 0.395 MRKNCTSLQEKLIKEEAEKSAAVESLVKEREARLDIERSHTTLSEDLGRTEREIQSANQKISSLNEMYKRLQEYITSLQQYNGKLHTELSSVEDELKRVEKEKATAAENIAMLRGQLTLSISSQEEATKQKDDLASEVYSMRGELKQVRDDRDCQLSRAQTLNADLMKLKESRENSSIELDSLTLKANELKEKTSLKENQIKALQEKLAAAEKKLQVTDISVFETRTEFEGQKKFVDELQRRLEDTEFKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLSDESRSTEGKIFSYPTSMEASGRGIDLSQNGQKHSFTFDKVFIQDVSQEEIFVEVSQLVQSALDGYKVCIFAYGQTGSGKTYTMMGKPGHPDEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLLSTNRSSYDATRLENGTPGKQYTIKHDANGNTQVSDLTVVDVHSAKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSVGESLCSLRFASRVNACEIGTPRRQTNGRATDSRLRYC 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme702g00001 631 FunFam Kinesin-like protein 216 612 - -
Trme702g00001 631 Coils Coil 40 74 - -
Trme702g00001 631 SUPERFAMILY Tropomyosin 21 246 - -
Trme702g00001 631 SMART kinesin_4 268 618 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme702g00001 631 CDD KISc_C_terminal 268 612 - -
Trme702g00001 631 Coils Coil 159 221 - -
Trme702g00001 631 Pfam Kinesin motor domain 276 608 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme702g00001 631 Coils Coil 82 116 - -
Trme702g00001 631 ProSitePatterns Kinesin motor domain signature. 510 521 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trme702g00001 631 Coils Coil 236 256 - -
Trme702g00001 631 ProSiteProfiles Kinesin motor domain profile. 270 610 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme702g00001 631 PRINTS Kinesin heavy chain signature 480 497 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme702g00001 631 PRINTS Kinesin heavy chain signature 346 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme702g00001 631 PRINTS Kinesin heavy chain signature 511 529 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme702g00001 631 PRINTS Kinesin heavy chain signature 560 581 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme702g00001 631 Gene3D Kinesin motor domain 215 612 IPR036961 -
Trme702g00001 631 PANTHER KINESIN-LIKE PROTEIN KLP-3 123 617 IPR027640 GO:0003777|GO:0007018
Trme702g00001 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 230 608 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme702g00001 Trme-Chr702 121 3733 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme702g00001 18 607 Calmodulin-binding Proteins AT5G65930 33.558 9.11e-80 273