Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme70149g00001 ATGGAATTTGAAGGGCAAAAATATCCACTTTCTCCTCAGCAGCTTCTTCTCAGAGACTCAAAACTTCGTAATACAGACTACGTATTTGGAGCAGTCATTTTTACCGGCCACGACACGAAGGTTATTCAAAACACCACTGACCCTCCTTCGAAAAGAAGCAAAATCGAGAAGAAGATGGATAAGATTATCTACTTCTTATTTGGTGTGCTGTTTTTAATTGCTTTTGTTGGATCTATTATCTTTGGAATCGTAACCAAACGCGACTTGCACAACGGATTTATGAAAAGATGGTATCTGAGACCAGATGATTCCACTATTTTCTTTGATCCTAAAAGAGTCGTCGCAGCTTCTGTATATCATTTCTTGACGGCTTTAATGCTATATAACTTCTTCATTCCCATCTCCTTGTATTTCTCGATTGAATTGGTTAAAATCCTTCAAAGCATCTTCATTAATCAAGATATCAATATGTACTATGAAGAACTGGACAAACCAGCTCTTGCACGTACTTCAAACTTGAATGAAGAACTTGGCCAAATTGACACGATCCTTTCTGATAAAACTGGAACTTTGACTTGCAACTCGATGGAGTTCATCAAATGTTCTGTTGCCGGGGTAGCTTATGGCCGTGTTGTTACAGAGGTTGAACAAGCCATTGGCAGTATAAGTAATAGTTCACCTATGATTCATGAACATGTTAATAGGTTGGAACAGATTACAGTTGATACCAGAGAAGCTCATGATCGAAAAGAACCGATCAAAGGTTTTAACTTTATAGATGAAAGGATAATGAATGGAAACTGGGTTAATGAGCCTC 817 0.3794 MEFEGQKYPLSPQQLLLRDSKLRNTDYVFGAVIFTGHDTKVIQNTTDPPSKRSKIEKKMDKIIYFLFGVLFLIAFVGSIIFGIVTKRDLHNGFMKRWYLRPDDSTIFFDPKRVVAASVYHFLTALMLYNFFIPISLYFSIELVKILQSIFINQDINMYYEELDKPALARTSNLNEELGQIDTILSDKTGTLTCNSMEFIKCSVAGVAYGRVVTEVEQAIGSISNSSPMIHEHVNRLEQITVDTREAHDRKEPIKGFNFIDERIMNGNWVNEP 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme70149g00001 272 Gene3D - 31 46 - -
Trme70149g00001 272 ProSitePatterns E1-E2 ATPases phosphorylation site. 186 192 IPR018303 -
Trme70149g00001 272 Gene3D - 181 193 IPR023214 -
Trme70149g00001 272 Gene3D - 194 216 IPR023299 GO:0000166
Trme70149g00001 272 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 7 269 - -
Trme70149g00001 272 SUPERFAMILY Calcium ATPase, transmembrane domain M 46 178 IPR023298 -
Trme70149g00001 272 SUPERFAMILY HAD-like 172 221 IPR036412 -
Trme70149g00001 272 Gene3D - 47 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme70149g00001 Trme-Chr70149 7 823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme70149g00001 1 271 Primary Pumps ATPases AT1G68710 71.168 2.41e-135 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme70149g00001 K01530 - gmx:100798329 464.922