Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme70146g00001 GTCTACTTAGGAGAGCAGTATGTAAACAATGCTACATTGTCCGATGTTACATTTTTGGTTGAAGGCAAACGATTTTATGCTCATAGAATTTGTCTGCTTGCATCTTCAGATGCATTTCGTGCAATGTTTGATGGTGGTTATAAGGAGAAGGATGCAAGGGACATAGAGATCCCAAATATTAGATGGGAAGTTTTCGAGTTGATGATGAGGTCTAATAAATTGTGCAGTCATGTATAA 237 0.3755 VYLGEQYVNNATLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYKEKDARDIEIPNIRWEVFELMMRSNKLCSHV 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme70146g00001 78 ProSiteProfiles BTB domain profile. 14 70 IPR000210 GO:0005515
Trme70146g00001 78 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 1 70 IPR044282 -
Trme70146g00001 78 Gene3D Potassium Channel Kv1.1; Chain A 4 71 IPR011333 -
Trme70146g00001 78 SUPERFAMILY POZ domain 6 70 IPR011333 -
Trme70146g00001 78 Pfam BTB/POZ domain 6 70 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme70146g00001 Trme-Chr70146 102 811 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trme70146g00001 BTB 5.7e-16 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme70146g00001 - - qsa:O6P43_003393 144.436