Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme70115g00001 ATTGACATTTTACATCTCCAGGGGAAAAAACCAGATGCTTTGTATCAAGTGAAGGATCCAGAAGTGCGAGAATTCATTGATAAATGCCTCGCAACAGTGTCTCTAAGACTCTCTGCAAGGGAGCTTCTGGATGATCCTTTTCTTCGAATTGATGATGACGAATATGATTTGAGATCGGTAGATGTTGGAGAGTTTGGTGACTTGGGTCCTCTAGTTTGTCAGTCATTCCTTTCACTCGACCGTAGCTATAGTAACATAAGTACTGAATATTCAAATGGTTTTGGGTATGAAGTAGATTGGTATTCTCAACCAGCTGAGATTGAACATGGAATTGAACTTTTCGAGTGCCATGACGATGAACCCTCCAAAGATGTTGACATAAGCATCAAAGGCAAGAAAAAAGATGACGGTGGCATCTTTTTGAGACTAAGAATTGCAGACAAAGAAGGTCATATCCGAAATATTTATTTCCCATTCGACATAGAGTTGGACACAGCATTAAGCGTAGCAACTGAAATGGTTGCGGAACTCGACATTACGGATCAGGATGTTACAAGCATAGCCGGTATGATAGATGGAGAAATTGCTTCCTTGGTACCCGAATGGAGGACAGAACCAGGCAACGAGGAAACCACCAACTATGCAAATCAAAGTTTCTGTGACAATTGCGTGTCTAATCATACTACAGTTACAGATTTTCTTTCACCTAATGAAG 715 0.407 IDILHLQGKKPDALYQVKDPEVREFIDKCLATVSLRLSARELLDDPFLRIDDDEYDLRSVDVGEFGDLGPLVCQSFLSLDRSYSNISTEYSNGFGYEVDWYSQPAEIEHGIELFECHDDEPSKDVDISIKGKKKDDGGIFLRLRIADKEGHIRNIYFPFDIELDTALSVATEMVAELDITDQDVTSIAGMIDGEIASLVPEWRTEPGNEETTNYANQSFCDNCVSNHTTVTDFLSPNE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme70115g00001 238 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 140 193 IPR024678 GO:0004674|GO:0005524
Trme70115g00001 238 Gene3D - 137 232 - -
Trme70115g00001 238 FunFam probable serine/threonine-protein kinase WNK9 137 221 - -
Trme70115g00001 238 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme70115g00001 Trme-Chr70115 14 822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme70115g00001 6 237 MAP Kinase Kinase Kinase AT3G04910 56.985 5.02e-88 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme70115g00001 K08867 - gmx:100272199 340.502