Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme7010g00001 ATGGAATCTCGATTGGTTGATGGAAGTGACCGGACAGAAGTTTCTGGGGATGCTGATTTCGTGGAACCAAATGATGGGTGTAGATTGCAAGAGAATTATTCTGGGAGAGAATTGGGTAGCTCTCATCATGATCATGCTATTCAGGAACCATATGAAGGCATGGAATTTGCATCTGAAGATGCGGCTAAGATATTTTATGATGAATACGCCCGACATGTTGGATTTGTCATGCGTGTGATGTCTTGTCGACGGTCAGAAAGAGATGGTAGGATTCTTGCTCGCAGGCTTGGGTGTAATAAGGAAGGTCATTGTGTCAGCATACGAGGGAAACTTGGGCCAGTTCGGAAAACAAGGGCAAGCTCAAGGGAAGGTTGTAAGGCGATGATTCATATCAAGTATGACAAATCTGAAAAATGGGTGATAACAAAGTTTGTGAAAGATCATAATCATCCACTAGTAGTCTCTCCACGTGAAGCACGGCAAACAATGGATGAGAAGGATAAGAAAATTCAGGACCTAACAGCAGAACTTCGGATTAAGAAACGGTTGTGTGTAACTTATCAAGAACAGTTAACTTCTTTTATGAAAATTGTCGAAGAGCACAGTGACAAGCTGTCTGCAAGAATTCATCACATACTTGATAATCTTAAAGAATATGAATCCATAGAAGAGCTTTTGCACCAGACGTAG 690 0.4145 MESRLVDGSDRTEVSGDADFVEPNDGCRLQENYSGRELGSSHHDHAIQEPYEGMEFASEDAAKIFYDEYARHVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKLGPVRKTRASSREGCKAMIHIKYDKSEKWVITKFVKDHNHPLVVSPREARQTMDEKDKKIQDLTAELRIKKRLCVTYQEQLTSFMKIVEEHSDKLSARIHHILDNLKEYESIEELLHQT 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme7010g00001 229 MobiDBLite consensus disorder prediction 1 26 - -
Trme7010g00001 229 MobiDBLite consensus disorder prediction 1 18 - -
Trme7010g00001 229 Coils Coil 163 183 - -
Trme7010g00001 229 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 30 221 - -
Trme7010g00001 229 Pfam FAR1 DNA-binding domain 65 153 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme7010g00001 Trme-Chr7010 424 1650 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trme7010g00001 FAR1 4.3e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme7010g00001 - - pvu:PHAVU_005G002900g 377.481