Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme70031g00001 ATGTACGATCATTCGTTATCCTATTCCAATTCCTCATCATCGGCTGGTACTAAAAAATTTGGCAGTCATGCTCATGCAATCCGAAAAGCGATGCAGATGTTGAAAGCTCAATTTGGGCATCCCCACATATCATTATTGTCATCTTCATCATCAATTATTAATAATATTGATGTTGATGTTGTTGCTACTGATGGTGTTGCTATTGGAGATGGTAATAAGAACAAAAGGAAGAAGAAAACAAAAACTATTAATGATGGTAGAATTCACAACCTACCACACTCGAAATATGGACCATACACTTGTTCAGACTGCTTCCAGGTAGTGCCTACATCTCAAAAATTTGCTAATCATGTGACGAGTCATTACAGGGCTCGAAAGCTATCAGATCTCCAAGGTGATAAGTCATACGTTGCTCATGTCAATGATGAAGATCATAATTAG 441 0.3741 MYDHSLSYSNSSSSAGTKKFGSHAHAIRKAMQMLKAQFGHPHISLLSSSSSIINNIDVDVVATDGVAIGDGNKNKRKKKTKTINDGRIHNLPHSKYGPYTCSDCFQVVPTSQKFANHVTSHYRARKLSDLQGDKSYVAHVNDEDHN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme70031g00001 146 ProSitePatterns Zinc finger C2H2 type domain signature. 101 121 IPR013087 -
Trme70031g00001 146 MobiDBLite consensus disorder prediction 1 19 - -
Trme70031g00001 146 MobiDBLite consensus disorder prediction 1 20 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme70031g00001 85 124 C2H2 Transcription Factor Family AT2G18490 62.500 7.76e-13 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trme70031g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme70031g00001 - - mtr:112419833 96.2857