Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme699304g00001 ATGTCAAATGGGAGTCTAGAAAAGATGTTGCACGATAATGAAGGCTCTGGAAATCATAATCTCAACCTCGCACAAAGGGTAGACATTGCTCTTGATGTAGCTCATGCATTGGATTATCTTCACAATGATGCAGAGCAAGTTGTAGTTCACTGTGATATTAAGCCGA 166 0.4036 MSNGSLEKMLHDNEGSGNHNLNLAQRVDIALDVAHALDYLHNDAEQVVVHCDIKP 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme699304g00001 55 ProSiteProfiles Protein kinase domain profile. 1 55 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme699304g00001 55 SUPERFAMILY Protein kinase-like (PK-like) 1 55 IPR011009 -
Trme699304g00001 55 Gene3D Transferase(Phosphotransferase) domain 1 1 55 - -
Trme699304g00001 55 PANTHER RECEPTOR-LIKE PROTEIN 55 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme699304g00001 Trme-Chr699304 10 175 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme699304g00001 1 55 Receptor kinase-like Gene Family AT3G47090 47.458 1.65e-11 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trme699304g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme699304g00001 - - mtr:11438431 103.605