Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69710g00001 AAGTGCCAGACTCTAATATCTGGTGGTGTGAGAGGAACCCTACCTTGGATGGCACCTGAACTCCTGAATGGAAGCAGTAGCCTTGTTTCAGAAAAGGTTGATGTTTTCTCATTTGGTATTGTCATGTGGGAACTCCTCACTGGAGAAGAGCCGTATGCTAATTTGCACTATGGGGCCATCATAGGTGGCATTGTGAACAACACTTTGCGGCCTCCGGTTCCAGAATCTTGTGATCCAGAATGGAGGGTACTGATGGAGAGGTGCTGGTCATCAGAACCAACAGAAAGACCTTCATTTACCGAGATTGCCAATGATTTACGTTCCATGGCAGCCAAGATCTCTCCCAAAGGACAAAATCAACAGCAGCAACCTACTTCATCTCAGAATCAAGTGCAGAGATAA 402 0.4627 KCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGEEPYANLHYGAIIGGIVNNTLRPPVPESCDPEWRVLMERCWSSEPTERPSFTEIANDLRSMAAKISPKGQNQQQQPTSSQNQVQR 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69710g00001 133 MobiDBLite consensus disorder prediction 110 133 - -
Trme69710g00001 133 Pfam Protein tyrosine and serine/threonine kinase 11 106 IPR001245 GO:0004672|GO:0006468
Trme69710g00001 133 PANTHER SERINE-THREONINE PROTEIN KINASE 7 108 - -
Trme69710g00001 133 SUPERFAMILY Protein kinase-like (PK-like) 6 106 IPR011009 -
Trme69710g00001 133 ProSiteProfiles Protein kinase domain profile. 1 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme69710g00001 133 MobiDBLite consensus disorder prediction 113 133 - -
Trme69710g00001 133 Gene3D Transferase(Phosphotransferase) domain 1 2 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme69710g00001 Trme-Chr69710 66 655 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69710g00001 1 126 MAP Kinase Kinase Kinase AT3G46920 77.778 2.53e-67 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Trme69710g00001 PK_Tyr_Ser-Thr 6.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme69710g00001 - - gmx:100776264 232.646