Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69651g00001 CCTGCGAAAACAGACAAGGCTGCTATCCTGATAGATGCTGTGCGAATGGTGACACAGTTAAGGGGTGAGGCCCAAAAGCTTAAAGATGCTAATATGGGTCTTCAAGAAAAAATTAAAGAGTTAAAGGTTGAAAAGAATGAACTTCGTGACGAGAAACAGAGGCTCAAGGCAGAGAAAGAGAAATTGGAGCAGCAGCTGAAATCTATCAATGCACAACCTAGTTTCTTGCCTGCCCCCCCTACTGCACTCCCTGCTGCATTTGCTGCGCAAGGCCAAGCCCATGGCAACAAGCTGGTACCCTTTCTTAGTTATCCAGGAGTTGCAATGTGGCAATTTATGCCACCTGCTGCAGTGGATACCTCACAGGATCACGTACTTCGTCCTCCAGTTGCCTAA 396 0.4722 PAKTDKAAILIDAVRMVTQLRGEAQKLKDANMGLQEKIKELKVEKNELRDEKQRLKAEKEKLEQQLKSINAQPSFLPAPPTALPAAFAAQGQAHGNKLVPFLSYPGVAMWQFMPPAAVDTSQDHVLRPPVA 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69651g00001 131 Coils Coil 17 72 - -
Trme69651g00001 131 PANTHER BHLH TRANSCRIPTION FACTOR 1 131 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Trme69651g00001 131 Gene3D - 10 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme69651g00001 Trme-Chr69651 3 555 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69651g00001 1 131 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 83.459 3.74e-74 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme69651g00001 - - gmx:100788858 207.223