Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69626g00001 AGAGGCCTATACACTGACTATAAGATGCAGACCGAGGAGGGAAAACTCACAGAGCTATACGTTCCAAGACAATGCTCTGCCACCAACAGACTGGTAACCGCAAAGGAACACACCTCTGTCAAAACATCTCTGGCGATGTGGATAAGAATGGTGCTACACTCGTCAATTTTCCAGTTTCGGCCTCCATGGTTTCACCCCAACACAGGTGTGTGTCGATTGTCGATATATTATGTTTGA 237 0.4641 RGLYTDYKMQTEEGKLTELYVPRQCSATNRLVTAKEHTSVKTSLAMWIRMVLHSSIFQFRPPWFHPNTGVCRLSIYYV 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69626g00001 78 Pfam Ribosomal protein S21e 9 45 IPR001931 GO:0003735|GO:0005840|GO:0006412
Trme69626g00001 78 Gene3D - 4 58 IPR038579 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69626g00001 9 73 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 42.254 1.93e-14 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme69626g00001 K02971 - qsa:O6P43_026420 64.3142