Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69510g00001 ATGCTGCAGATATCATCCAGATGGGATCCATTCGAAGCATGTCGGCCTATAATTGGTGAAGCACCTGTTTTTTATCCTACTTATGAGGAGTTTGAAGACACACTTGGTTACATAGCTAAGATACGTCCTCTAGCCGAACCCTATGGCATATGTAAAGTTGTCCCTCCGGCTTGCTGGGTTCCACCTTGCCCTCTTAAGGATAAAGAGATATGGGAAAATGCTAAATTTCCAACCCGTATTCAGCAAGTTGACTTGCTTCAGAACCGCGAGCCAATGAGGAAGAAAAGTAGGGGAAGGAAAAGAAAGCGTGGAAAGCCGTCAAAGATGGGAGCATGTAATAGGAGAACTGTAAATTCATGTTCTGAAGCTGATGCTACTACTTCTGAATCTGATGATAAGTTTGGATTCCAATCAGGACCAGACTTCACACTTAAAGAATTTCAGCAATATGATAATTCTTTTAAAGATTGCTACTTCCAATTGAATGATTGCAAAGATGGGGAA 504 0.4147 MLQISSRWDPFEACRPIIGEAPVFYPTYEEFEDTLGYIAKIRPLAEPYGICKVVPPACWVPPCPLKDKEIWENAKFPTRIQQVDLLQNREPMRKKSRGRKRKRGKPSKMGACNRRTVNSCSEADATTSESDDKFGFQSGPDFTLKEFQQYDNSFKDCYFQLNDCKDGE 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69510g00001 168 MobiDBLite consensus disorder prediction 93 109 - -
Trme69510g00001 168 Gene3D Cupin 6 168 - -
Trme69510g00001 168 ProSiteProfiles JmjN domain profile. 21 62 IPR003349 -
Trme69510g00001 168 PANTHER LYSINE-SPECIFIC DEMETHYLASE 17 159 - -
Trme69510g00001 168 MobiDBLite consensus disorder prediction 112 134 - -
Trme69510g00001 168 Pfam jmjN domain 22 55 IPR003349 -
Trme69510g00001 168 SMART JmjN_1 20 61 IPR003349 -
Trme69510g00001 168 MobiDBLite consensus disorder prediction 87 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme69510g00001 Trme-Chr69510 1 598 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69510g00001 3 163 JUMONJI Transcription Factor Family AT2G34880 54.938 1.28e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Trme69510g00001 JmjN 7.1e-18 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme69510g00001 K11446 - gmx:100784581 246.899