Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69485g00001 ATGCTTACATGCATAGCACGTCCGAAGAAACTCGGCGACGACTCAGTGAGTAACGAAAACGATTCAGAATCAAACAACAATGCAAAAACGGTAAAATCGCTGACGTGTCAGATTAAAGACATGGCGTTAAAAGCTTCAGGTGTTTACAAAAACTGTAATCCATGTGTTCCAGCGAGTCGACTCAGAAACGGTGGTTCTGAGTCGGAAACTGACTCGGAGAANTTTAGGAGGACGAGAACGTGGGGGAAGGAAATGGAAGCGAGGTTGAAAGGGATCTCGAGTGGAGAAGGAACGCCGAGTTCTTCTTCGTCGTCGTTTGGCGGTGGTAGTGGGAGGAGAGTGGTGGTTTTGGAGGAGGAGGAAGGGAAGGAGTGGGTGGCGCAGGTGGAGCCTGGCGTTTTGATTACTTTTGTGTCGCTTTTACGTGGCGGGAATGATCTCAAGCGTATACGGTTCAGTCCTGATATTTTCATACCTGATCTCTCTGTTAACCAACAATAA 501 0.477 MLTCIARPKKLGDDSVSNENDSESNNNAKTVKSLTCQIKDMALKASGVYKNCNPCVPASRLRNGGSESETDSEXFRRTRTWGKEMEARLKGISSGEGTPSSSSSSFGGGSGRRVVVLEEEEGKEWVAQVEPGVLITFVSLLRGGNDLKRIRFSPDIFIPDLSVNQQ 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69485g00001 166 MobiDBLite consensus disorder prediction 66 90 - -
Trme69485g00001 166 Pfam Transcription factor BRX N-terminal domain 22 55 IPR027988 -
Trme69485g00001 166 ProSiteProfiles BRX domain profile. 123 166 IPR013591 -
Trme69485g00001 166 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 157 IPR044532 -
Trme69485g00001 166 MobiDBLite consensus disorder prediction 59 110 - -
Trme69485g00001 166 MobiDBLite consensus disorder prediction 94 109 - -
Trme69485g00001 166 MobiDBLite consensus disorder prediction 1 30 - -
Trme69485g00001 166 Pfam Transcription factor regulating root and shoot growth via Pin3 123 157 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme69485g00001 Trme-Chr69485 199 814 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69485g00001 1 157 Major Intrinsic Protein MIP AT1G31880 38.251 2.96e-24 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme69485g00001 - - csv:101207829 160.229