Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69475g00001 GACAAGGCTATCAAGAGATTTTTGGTTAGGAACATTGTTGAACAAGCTGCTGTTAGAGATGTTCAGGAAGCTTGTGTCTATGACCAATACACTCTTCCTAAGCTGTATGTGAAGATGCAGTACTGTGTTTCATGTGCTATCCATTCTCATGTTGTGAGGGTTAGATCTCGCACTGATAGGAGGAAGCGTGACCCTCCACAGCGCTTCGTCAGGCGCAGGGTAATTAACTAG 231 0.4502 DKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFVRRRVIN 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69475g00001 76 PANTHER 40S RIBOSOMAL PROTEIN S26 1 72 IPR000892 GO:0003735|GO:0005840|GO:0006412
Trme69475g00001 76 Gene3D Ribosomal protein S26e 1 76 IPR038551 -
Trme69475g00001 76 ProSitePatterns Ribosomal protein S26e signature. 41 48 IPR000892 GO:0003735|GO:0005840|GO:0006412
Trme69475g00001 76 Pfam Ribosomal protein S26e 1 72 IPR000892 GO:0003735|GO:0005840|GO:0006412
Trme69475g00001 76 MobiDBLite consensus disorder prediction 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme69475g00001 Trme-Chr69475 107 503 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69475g00001 1 73 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 82.192 3.73e-39 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme69475g00001 K02976 - gmx:100781822 138.658