Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69474g00001 ATTAATGACACTCCTAGTGGTGAAAATGATCCTGAATCATGGCATGTTCAGATATTTCGTTCAATTGATTCAAGTTCTGTTAAGAGATTTCCAAAAGATCCAAGAGAGGCAACTGGCAAGAACCTTGTATGCGGGAAGAATGTGCTGATTGACATGAGCATACATACAGCATACGTGAAGGCTATTCGTGCTGCACAGCATTACATTTATATAGAGAATCAATATTTCATCGGGTCTTCTTACAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTAATACCGATGGAAATTGCTCTAAAGATTGCGGAAAAGATTAAAGCAAATGAGAGGTTTGCAGTGTATATAGTTATTCCAATGTGGCCAGAAGGTGTTCCAACAGGTGCTGCCACGCAAAGGATTCTCTTCTGGCAG 417 0.3933 INDTPSGENDPESWHVQIFRSIDSSSVKRFPKDPREATGKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQ 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69474g00001 139 PANTHER PHOSPHOLIPASE D 5 139 IPR015679 -
Trme69474g00001 139 Gene3D Endonuclease Chain A 16 135 - -
Trme69474g00001 139 SUPERFAMILY Phospholipase D/nuclease 54 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme69474g00001 Trme-Chr69474 60 825 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69474g00001 1 139 Phospholipase D Gene Family (Wang group) AT2G42010 87.143 1.75e-82 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme69474g00001 K01115 - gmx:100801286 268.855