Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme6945g00001 ATGTTTGCTTTAGTTTTGTCATTTGGCCTTCTTTTTACTGGTCTAGGAAGCCGCAAGGCTAGATCCTGGCGTTACGGGACAGGTTGGCTAAGAGGATTTATAGCTGATTATGGAGTCCCCTTAATGATTCTTGTATGGACTGCTGTGTCTTATATACCCGTCAACGAAGTCCCAAAGGGAGTTCCTAGGCGACTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTTGTCAAGGAAATGTTGAATGTGCCTCTAATGTACATTATTGGAGCATTTATACCAGCAACTATGATTGCTGTGCTTTACTATTTTGATCACAGTGTTGCATCACAACTTGCGCAGCAAAAGGAGTTCAATTTAAGAAAACCCTCATCTTATCATTATGACTTGCTACTTCTGGGATTTTTGACCTTATTGTGTGGGCTTATTGGAATTCCTCCTTCCAATGGCGTGATTCCACAATCTCCAATGCATACCAAGAGCTTAGCTACTCTTAAACATCAGATTTTACGGCATAAGCTTGTCTCTACTGCAAGAACGAGCATGGAGAAAAACATGAACCTGAGTCAGTTATACGAAAGTATGAAAGAAGCATACGATGTAATGCAGACGCCATTGGTTCCCCAAATGCCACCCACATTGGGGCTGAAAGAGTTGAAGGAGTCTACCGTTGCACTGGCTTCAAGTCATGGATACATTGATGCCCCTGTTGATGAAATTGTCTTTGATGTGAATAAGGATGTTGATGACCTTTTGCCAGTTGAAGTTAAAGAGCAGCGCCTCAGCAATCTACTTCAAGCATCGATGGTTGCAGCTTGTGTTGCTGCTATGCCTCTTTTGAAGAAGATACCAACTTCAGTGCTTTGGGGTTACTTTGCCTTCATGGCAATTGAAAGCTTGCCAGGAAATCAGTTTTGGGAGAGAATATTGTACCTTTTCACTGCTCCAAGTCGAAGATACAA 977 0.4237 MFALVLSFGLLFTGLGSRKARSWRYGTGWLRGFIADYGVPLMILVWTAVSYIPVNEVPKGVPRRLFSPNPWSPGAYSNWTVVKEMLNVPLMYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLLCGLIGIPPSNGVIPQSPMHTKSLATLKHQILRHKLVSTARTSMEKNMNLSQLYESMKEAYDVMQTPLVPQMPPTLGLKELKESTVALASSHGYIDAPVDEIVFDVNKDVDDLLPVEVKEQRLSNLLQASMVAACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRY 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme6945g00001 325 Pfam HCO3- transporter family 259 320 IPR011531 GO:0006820|GO:0016020
Trme6945g00001 325 Pfam HCO3- transporter family 2 172 IPR011531 GO:0006820|GO:0016020
Trme6945g00001 325 PANTHER ANION EXCHANGE PROTEIN 1 325 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme6945g00001 Trme-Chr6945 230 1904 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme6945g00001 1 325 Antiporters AT2G47160 80.000 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme6945g00001 K24194 - gmx:100793554 600.512