Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69434g00001 GAAGTTGATATCTGGAGTGCTGGAGTTATTCTATACATCTTACTTTGTGGTGTCCCTCCATTTTGGGCAGAAACCGAGCAAGGAGTTGCACAAGCAATTATACGATCTGTTGTTGATTTCAAAAGGGATCCATGGCCAAAGGTTTCTGATAATGCAAAAGACCTTGTGAAGAAGATGCTCAATCCTGACCCAAAGCGGCGACTTACTGCACAAGAAGTGTTAGGTAGATCATCCATGGTTAGTAAATGCAAAGAAAGCTCCCAATGTTTCGTTAGGAGAAACAGTTAG 288 0.4201 EVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVVDFKRDPWPKVSDNAKDLVKKMLNPDPKRRLTAQEVLGRSSMVSKCKESSQCFVRRNS 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69434g00001 95 ProSiteProfiles Protein kinase domain profile. 1 80 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme69434g00001 95 Pfam Protein kinase domain 1 75 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme69434g00001 95 SUPERFAMILY Protein kinase-like (PK-like) 2 75 IPR011009 -
Trme69434g00001 95 Gene3D Transferase(Phosphotransferase) domain 1 1 94 - -
Trme69434g00001 95 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 80 - -
Trme69434g00001 95 FunFam Calcium-dependent protein kinase 7 24 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme69434g00001 Trme-Chr69434 1 700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69434g00001 1 74 EF-hand Containing Proteins AT2G41860 86.486 3.38e-45 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme69434g00001 Pkinase 3.7e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme69434g00001 K13412 - rvl:131318998 152.525