Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69400g00001 GGCAATCGTAGTCCTGATGCTAATGGGGACAATGAGAGTGACAAAAAGAGGGTGCGACGCCCCTACCATGCTAAGACATTCAAAGTTGAGATTAGCTTTGCTACTAAAGTTCCTATGTATGCCATTGCCAATGCGTTACGCGGGCAGGAAACAGAGAATTTCCAAGAAGCTGTTAGAGTTCTTGATATCATTTTGAGGCAACATGCTGCTAAGCAGGGCTGCCTACTTGTGCGCCAGAATTTCTTCCACAATGATCCCAAGAATTTTGCTGATGTGGGGGGTGGTGTTCTAGGCTGTAGAGGATTCCATTCAAGTTTTAGAGCTACACAAAGCGGGCTATCTCTTAACATAGATGTCTCAACTACTATGATAATTCAACCTGGCCCTGTGGTGGATTTCTTAATTTCCAATCAAAATGTGAGAGATCCTTTTAGTCTTGACTGGACAAAGGCCAAAAGGACACTAAAAAATCTGAGGGTTAAAACTCATCCATCCAATCAAGAGTTTAAAATTTGTGGACTCAGTGAAGTCCCATGCAAAGAGCTTACGTAT 552 0.4275 GNRSPDANGDNESDKKRVRRPYHAKTFKVEISFATKVPMYAIANALRGQETENFQEAVRVLDIILRQHAAKQGCLLVRQNFFHNDPKNFADVGGGVLGCRGFHSSFRATQSGLSLNIDVSTTMIIQPGPVVDFLISNQNVRDPFSLDWTKAKRTLKNLRVKTHPSNQEFKICGLSEVPCKELTY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69400g00001 184 SUPERFAMILY PAZ domain 46 167 IPR036085 GO:0005515
Trme69400g00001 184 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 14 183 - -
Trme69400g00001 184 Gene3D paz domain 121 184 - -
Trme69400g00001 184 Pfam N-terminal domain of argonaute 9 65 IPR032474 -
Trme69400g00001 184 Pfam Argonaute linker 1 domain 77 125 IPR014811 -
Trme69400g00001 184 CDD PAZ_argonaute_like 127 183 - -
Trme69400g00001 184 SMART DUF1785_2 75 127 IPR014811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme69400g00001 Trme-Chr69400 1 827 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69400g00001 12 184 Eukaryotic Initiation Factors Gene Family AT5G43810 33.889 1.39e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme69400g00001 K11593 - gmx:100820376 326.25