Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69309g00001 ATGGGATTCCGATTACCTGCTATCAGAAAGTCATCATCTTCCAAGGTTGTGGATGAAGTGGCAAAAGGCTATCTTGCAGTTTATGTTGGAAACAAAATGAAGCGGTTTGTGATTCCCGTTTCATTCTTGAATCAACCTTCTTTTCAAGAATTATTAAGCCTGTCAGAAGAAGAGTTTCAATATGATCATCCAATGGGGGGTCTCACAATTCCTTGCAAAAAGAAAGTTCCTGAGGTGGTACTAAATTCAGGCAAAAAGATGGAAGCAAAGAAAGTTCCTGAGGTGGTACTAAATTCAGGCAAAAAGATGCCAACGATAGGATTTGGAACAGGAACAATTCCTCCTCCACAAACTTTGCCTGATGCCATTGACATTGGCCAGAGAAATTTGGATATTTCTGATGAAATAATATG 413 0.3923 MGFRLPAIRKSSSSKVVDEVAKGYLAVYVGNKMKRFVIPVSFLNQPSFQELLSLSEEEFQYDHPMGGLTIPCKKKVPEVVLNSGKKMEAKKVPEVVLNSGKKMPTIGFGTGTIPPPQTLPDAIDIGQRNLDISDEII 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69309g00001 137 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 10 76 IPR003676 GO:0009733
Trme69309g00001 137 Pfam Auxin responsive protein 12 81 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme69309g00001 Trme-Chr69309 10 715 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69309g00001 19 73 Calmodulin-binding Proteins AT3G43120 54.545 2.34e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme69309g00001 - K14488 gmx:100500615 105.145