Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69274g00001 AACTCCGATAAAATTCAAGTTTACAAAGGACTTGATATTACAACAAACAAAGTCACCGATGAAGAGTGTCGTGGGGTCCACCATCATTTACTTGGAACCGTTGATCCTAATTTGAATTTCACATCCAACGATTTTTGTGAACACGCGACGGAAACAGTTGATTCTATTGTTGGAAGAAACGGGTTACCTATTATAGCCGGTGGATCTAATTCGTACATTGAAGCTTTGGTTAATCATTATCCTGAGTTTCGTACAAGGTACGAATGTTGTTTTCTTTGGGTGGATGTTGCATTTCCCGTGCTTCATTCGTCCTTATCCGCACGAGTTGATCGTATGATTGAAGCTGGTCAAGTGAACGAAGTTCGTGAANNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNAAGAGCCATTGGTGTGCCGGAATTTGACGAATTTTTTAGAGCTGAGTTAGAAGGAAGAGTTGATGAAAGAACCATGAAGAAACTTCTAGAAGTTGCTATTGATGCTCTTAAGATGAATAATATTAAGCTTGCAAATAGACAAGTTTCGAAGATTCATAGGCTTTATGGTATGTGGAAAAGAAACATGCACCGTCTTGATGCAACGGATGTTGTTCTTAAGGAAAGGAATTGGGAGGATTGTGTTTTGGCTAAGAGTCTTAGGATTGTTAATAAGTTTCTATACGAGGATTGTTATAATATTCCTCGTGTTGGTGGTGGTGGTCGTGGTGGTGGTGTTGTGCCTTCTGCCAAGGTGGCGGCAGCGATAACCCATTAG 786 0.383 NSDKIQVYKGLDITTNKVTDEECRGVHHHLLGTVDPNLNFTSNDFCEHATETVDSIVGRNGLPIIAGGSNSYIEALVNHYPEFRTRYECCFLWVDVAFPVLHSSLSARVDRMIEAGQVNEVREXXXXXXXXXXXXXXRAIGVPEFDEFFRAELEGRVDERTMKKLLEVAIDALKMNNIKLANRQVSKIHRLYGMWKRNMHRLDATDVVLKERNWEDCVLAKSLRIVNKFLYEDCYNIPRVGGGGRGGGVVPSAKVAAAITH 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69274g00001 261 Coils Coil 118 123 - -
Trme69274g00001 261 Gene3D - 1 230 IPR027417 -
Trme69274g00001 261 Pfam IPP transferase 6 83 - -
Trme69274g00001 261 Pfam IPP transferase 85 186 - -
Trme69274g00001 261 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 98 199 - -
Trme69274g00001 261 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 230 IPR039657 -
Trme69274g00001 261 Coils Coil 138 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme69274g00001 Trme-Chr69274 41 826 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69274g00001 1 90 C2H2 Transcription Factor Family AT2G27760 43.011 6.84e-20 86.7