Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69217g00001 ATGTTTTCTAATTGTATGATGATTCTTGCGAATAGGCAATCTGCTGCTCGATCGAAGGAGAGGAAAACTCGATATACAAGTGAGCTGGAGAGGAAGGTGCAGACGCTTCAAACCGAAGCAACTAACCTCTCTGCACAACTTACCATCCTTCAG 153 0.4444 MFSNCMMILANRQSAARSKERKTRYTSELERKVQTLQTEATNLSAQLTILQ 51
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69217g00001 51 Gene3D - 6 51 - -
Trme69217g00001 51 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 11 51 IPR004827 GO:0003700|GO:0006355
Trme69217g00001 51 SUPERFAMILY Leucine zipper domain 8 50 IPR046347 GO:0003700|GO:0006355
Trme69217g00001 51 Coils Coil 26 51 - -
Trme69217g00001 51 Pfam bZIP transcription factor 10 48 IPR004827 GO:0003700|GO:0006355
Trme69217g00001 51 CDD bZIP_plant_RF2 8 51 IPR044759 GO:0003700|GO:0006355
Trme69217g00001 51 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 8 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme69217g00001 Trme-Chr69217 24 270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69217g00001 8 51 bZIP Transcription Factor Family AT1G43700 86.364 1.58e-19 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trme69217g00001 bZIP_1 2.9e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme69217g00001 K20557 - lja:Lj0g3v0236609.1 82.8037