Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69197g00001 TTAGATGGTTTCAAGATACAAAGGGTTGTAACGCAGGACGAGTTTGAGAAAGTAAACAAAGAGTTATTTGAGAAGTGTGAAAAGCTAATCTTCGAATGCTTGCAAGATGCAAAGATAGAAGCCGAGAATATAAATGATATCATAATTGTAGGCGGATGTTGTAATATACCAAGGGTGAAGAATCTTGTTTCCAATGGAAAGGAAATTTATAAAGGTATAGATCCTTTGAATGCTGTACTTTATGGTGCAGCAGTGGCAGGAGCTGATATTCGAGGTGTAGACTCTTTTACTTCTCAAGTCACACTTCATGCCATCGGAATTCGAGGTGATGGGAAGAAATTCGCACCTGTTATTCCGAAGAACACATCAGTGCCAACGACGCGGCATAGAGTGTTTTCAACTGTTAATGATAATCAAACTACGGCATCGATTGTTGTCTACGAAGGCGATGAGGAGGGACAAGAGGCTGAAGAAAACAATGTTTTGGGAAATTTCGAAATAACTGAAATACCTGAAGCACCAAAAGGAGTTCCTGAAATCACTATTTCCATGAGCATAGACCGTAAAAACATTTTGACAATTACTGCTTTTGTTGGGATGCCAAGATTTACTCCTGTAATTACAAATTTTGATGATCAGTTCCTAATTAGAACATATGATAATACAATAGATTTGGCTAATCTCCTCGATGTGTAA 696 0.3793 LDGFKIQRVVTQDEFEKVNKELFEKCEKLIFECLQDAKIEAENINDIIIVGGCCNIPRVKNLVSNGKEIYKGIDPLNAVLYGAAVAGADIRGVDSFTSQVTLHAIGIRGDGKKFAPVIPKNTSVPTTRHRVFSTVNDNQTTASIVVYEGDEEGQEAEENNVLGNFEITEIPEAPKGVPEITISMSIDRKNILTITAFVGMPRFTPVITNFDDQFLIRTYDNTIDLANLLDV 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69197g00001 231 PRINTS 70kDa heat shock protein signature 73 93 - -
Trme69197g00001 231 PRINTS 70kDa heat shock protein signature 177 193 - -
Trme69197g00001 231 PRINTS 70kDa heat shock protein signature 44 60 - -
Trme69197g00001 231 PANTHER HEAT SHOCK PROTEIN 70KDA 3 196 IPR013126 GO:0005524|GO:0140662
Trme69197g00001 231 Pfam Hsp70 protein 3 196 IPR013126 GO:0005524|GO:0140662
Trme69197g00001 231 Gene3D - 26 70 - -
Trme69197g00001 231 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 93 204 IPR029047 -
Trme69197g00001 231 Gene3D Actin; Chain A, domain 4 2 25 - -
Trme69197g00001 231 Gene3D - 71 85 - -
Trme69197g00001 231 SUPERFAMILY Actin-like ATPase domain 2 88 IPR043129 -
Trme69197g00001 231 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 99 198 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme69197g00001 Trme-Chr69197 1 696 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69197g00001 1 196 Calmodulin-binding Proteins AT3G12580 39.512 1.07e-43 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme69197g00001 K09489 - gmx:100809773 227.639