Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69194g00001 ATGGAGAAAATAGGAGTAGTATTATCGGCGAAAGAGGCGTTCGAGAAGCTAGAGAAAGTTGGAGAAGGAACGTATGGGAAGGTTTATAGAGCAAGAGAGAAGGCTACTGGGAAGATCGTTGCTCTCAAGAAGACTCGTCTTCATGAAGATGATGAAGGTGTTCCTCCTACCACTCTTCGTGAGGTTTCCATTTTGCGAATGCTCTCTCGCGATCCACATGTTGTTAGGTTATTGGATGTGAAACAAGGTCAGAACAAGGAAGGAAAAACTGTGCTGTACTTGGTTTTCGAGTACATGGATACTGATCTCAAGAAATTCATTCGTACTTTTCGTCAAACTGGACAAAATATCCCACCCCCAGTCATCAAAGGCTTGATGTACCAACTTTGCAAGGGTGTTGCTTTCTGCCATGGCCATGGAATCTTACACAG 431 0.4385 MEKIGVVLSAKEAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLLDVKQGQNKEGKTVLYLVFEYMDTDLKKFIRTFRQTGQNIPPPVIKGLMYQLCKGVAFCHGHGILH 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69194g00001 143 FunFam Cyclin-dependent kinase B2,2 10 100 - -
Trme69194g00001 143 Gene3D Phosphorylase Kinase; domain 1 9 96 - -
Trme69194g00001 143 SMART serkin_6 14 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme69194g00001 143 Pfam Protein kinase domain 14 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme69194g00001 143 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Trme69194g00001 143 ProSiteProfiles Protein kinase domain profile. 14 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme69194g00001 143 PANTHER CELL DIVISION PROTEIN KINASE 12 143 - -
Trme69194g00001 143 Gene3D Transferase(Phosphotransferase) domain 1 97 143 - -
Trme69194g00001 143 SUPERFAMILY Protein kinase-like (PK-like) 11 143 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme69194g00001 Trme-Chr69194 12 665 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69194g00001 1 143 Core Cell Cycle Gene Families AT1G20930 82.759 1.84e-85 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Trme69194g00001 Pkinase 2.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme69194g00001 K07760 - gmx:100799839 267.314