Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69164g00001 GTGTTGTTCTCAACCAAAAAGCATCCAAGAACCAAGGATCTTTTGCCAGAAGATTTTTGGTTTACTGCACCAAAAAAGGGAGTGATGGTCTTTGCTTTGCCTGGAGAGCCTGGTCTCACAGAGTTGGCTGGGGACTTCAAAATCCATTTTCATGATCGCCAAGGAGATTTTTACTGTTGGTTGAACACAACCATGACAGAAAACAGGAAAGTTTTGAACACCAGTGATCTTGATGGCTTTGACAAG 246 0.4268 VLFSTKKHPRTKDLLPEDFWFTAPKKGVMVFALPGEPGLTELAGDFKIHFHDRQGDFYCWLNTTMTENRKVLNTSDLDGFDK 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69164g00001 82 ProSiteProfiles C2 tensin-type domain profile. 1 82 IPR014020 -
Trme69164g00001 82 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme69164g00001 Trme-Chr69164 312 774 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69164g00001 1 82 Protein tyrosine phosphatase (PTP) family AT3G19420 89.024 1.70e-49 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme69164g00001 K01110 - gmx:100784003 174.866