Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69139g00001 ATGAGGGTCAGCGCAGGTAATGCAAAGCTGTGTGGAGCCCCTTTAGGAGCATGCTTTCCGGAAAAGAAATCATTATCGATAAGTGTGAGCCGTATTGTGGTTGTGGTTCTTGTTAGTCTTGCAATGTTTGTGATTGCAGCAGTAATAATACTTGTCCTTATTAGAAGAAGAAAAAAAAAAGCTGAACAAGAACAACAAGAATCAGGAGTAGTGATTGGTGTAGTTGCCAACACCAGCAGCAGGGATAGTACTGTTCAAAAGAAAGGATCATCGTCATCACCAAATGACATTTCAGATGATCAAGGTTCAATAAGATCACGCGGAACCAGCAACGGTAGTAGAAGCATGAGGTTATCCTTTGTGAGGGAAGAAATATCAGAACAATTTGATTTGCAAGATCTATTGAGAGCCTCTGCCGAGATATTAGGAAGTGGTTGTTACAGTTCATCCTATAAGGCTGCTATGTTGACTGGCCCCACCGTTGTCGTCAAAAGATTCAAACAGATGAACAATGTTGACAGGCAAGAGTTTCGGGAACACATGCGAAGACTAGGAAGGTTGAATCATCCTAATCTCCTTCCTCTCCTGGCTTACTACTACAAAAGAGATGAGAAACTCTTCATTACCGACTTTGTTCGCAATGGCAGTTTGGCCATTCGCCTTCACG 667 0.4243 MRVSAGNAKLCGAPLGACFPEKKSLSISVSRIVVVVLVSLAMFVIAAVIILVLIRRRKKKAEQEQQESGVVIGVVANTSSRDSTVQKKGSSSSPNDISDDQGSIRSRGTSNGSRSMRLSFVREEISEQFDLQDLLRASAEILGSGCYSSSYKAAMLTGPTVVVKRFKQMNNVDRQEFREHMRRLGRLNHPNLLPLLAYYYKRDEKLFITDFVRNGSLAIRLH 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69139g00001 222 ProSiteProfiles Protein kinase domain profile. 136 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme69139g00001 222 Gene3D Phosphorylase Kinase; domain 1 103 211 - -
Trme69139g00001 222 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 222 IPR046959 -
Trme69139g00001 222 Pfam Protein tyrosine and serine/threonine kinase 140 221 IPR001245 GO:0004672|GO:0006468
Trme69139g00001 222 SUPERFAMILY Protein kinase-like (PK-like) 140 221 IPR011009 -
Trme69139g00001 222 MobiDBLite consensus disorder prediction 82 113 - -
Trme69139g00001 222 FunFam pollen receptor-like kinase 1 104 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme69139g00001 Trme-Chr69139 122 788 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69139g00001 2 222 Receptor kinase-like Gene Family AT5G35390 42.241 8.81e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trme69139g00001 PK_Tyr_Ser-Thr 1.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme69139g00001 - - lja:Lj2g3v0914400.1 206.453