Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme691314g00001 GCGGTGGCGGAGAACGACGACGAAGAAAGGCTGAAGACGGTGGGAGAAAATTTGGGTCGACAAGCGGAGCGTTTAAGAATCGGATTTGAATTCAAAGTGGTAACACAAAAACTTGCTGAGTTAACTCGCGAGTCATTAGGTTGTGACTCGGAGGATATTCTTGCTGTGAATTTCGCGTTCAAGCTATTCAGAATGCCAGACGAAAGTGTGTCAACGGAGAATCCACGCGACGCGCTTCTTAGGAGC 246 0.4837 AVAENDDEERLKTVGENLGRQAERLRIGFEFKVVTQKLAELTRESLGCDSEDILAVNFAFKLFRMPDESVSTENPRDALLRS 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme691314g00001 82 ProSiteProfiles GRAS family profile. 1 82 IPR005202 -
Trme691314g00001 82 Pfam GRAS domain family 4 81 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme691314g00001 1 81 GRAS Transcription Factor Family AT5G52510 57.317 1.35e-24 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme691314g00001 GRAS 7.3e-16 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme691314g00001 - - tpra:123914170 153.68