Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme69130g00001 AAATTGGATGAAGCAGCCTTGCAAAAAGTATTCCTCAAGTCCCTCGAGAATTACATAAATTGGTGCAACTACCTATGCATTACGCCTGTTTGGAGCAGTTTGGAGGCTGTCAGTAAAGAGAAGAAGTTGCTGTATGTTTCTTTATACCTACTAATATGGGGTGAAGCTTCAAATGTCAGGTTTCTACCGGAATGCCTGTGCTACATATTCCATCATTTTAGTTGCATTAATTTGATTGATAATATTGGTCTGAACTTGTTGAGTGGTGGTCCTAATGCAAACAAACAATGA 291 0.3849 KLDEAALQKVFLKSLENYINWCNYLCITPVWSSLEAVSKEKKLLYVSLYLLIWGEASNVRFLPECLCYIFHHFSCINLIDNIGLNLLSGGPNANKQ 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme69130g00001 96 SMART FKS1_dom1_2 40 89 IPR026899 -
Trme69130g00001 96 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 42 74 IPR026899 -
Trme69130g00001 96 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 5 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme69130g00001 Trme-Chr69130 306 816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme69130g00001 1 72 Cell Wall Biosynthesis AT3G07160 76.389 2.51e-39 136