Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme690828g00001 CCTGTCAAGATCATGACAGAAGAAAGATGCAAGACAAGTGTAGATAACCAATTTGGTGTCTCAATTAATGTTTATGAGGGTGAGAGAATAAGAGCTGGTGAGAACAACTTACTGGGTGTGTTTGGTCTCTTAGTTCCTTGTGCTCTTTGTATCAAAGTATGTTTTGCTATAGCTGTGGATGGTATTTTAAATGTCACTGCTGAGGAAGAAACCACTGGGAATAAGAAATAG 231 0.3853 PVKIMTEERCKTSVDNQFGVSINVYEGERIRAGENNLLGVFGLLVPCALCIKVCFAIAVDGILNVTAEEETTGNKK 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme690828g00001 76 PANTHER HEAT SHOCK PROTEIN 70KDA 4 75 IPR013126 GO:0005524|GO:0140662
Trme690828g00001 76 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 6 75 IPR029047 -
Trme690828g00001 76 Pfam Hsp70 protein 7 75 IPR013126 GO:0005524|GO:0140662
Trme690828g00001 76 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 76 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme690828g00001 Trme-Chr690828 2 232 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme690828g00001 7 75 Calmodulin-binding Proteins AT3G12580 54.054 1.49e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme690828g00001 K03283 - gmx:102667572 75.0997