Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme68955g00001 GTTGAACGGAGTGTTGAATTGCTTGAACAAGTTGTTGTTGCGTTGGATTTGGTTCTATGTAAAATTGAGAATCGTGACTCGANNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTTGTTTTGAAACAAGGAAGCTGTGAATCGAAGATTGCATCGGTTAGGGTTTTGAAATCCATAGCGGTTGATACAGAATCGAAGCTTCTAATAGCGGAAAAAGAAGGTTTAGTATCAGAATTGCTCAATCTAATCACGCCGGAGAAAGATCCGAACCTAATCGAGAACGCACTTTCGTGTCTGGTGGCAATCTCAACACCGAAACGGAATAAATCGAAACTTATTCATCTCGGAGCAGTGAAGGTATTCTCGAACCTTCTAACTTCTCCGTCTAACTTATGCGTTTCGGTGACGGAAAAGGTACTGAAACTTCTCGAAACGGTGTCATCAACGAAGGAAGGGAGATCGGAGATATGTGAAGAGCCGTCATGCGTGGCGGCGATAGTAAACAAGGTTTTAAAAGTGTCCACCGTGGCAACAGAGCACGCGGTTACGATACTGTGGAGTGTGTGTTATTTATTTCGTGATCAAAAAGCACAAGAATCAGTTACGAAAGCTAACGGATTGACGAAGATTTTGCTACTGATGCAGAGCAATTGCACGCCACAA 660 0.4106 VERSVELLEQVVVALDLVLCKIENRDSXXXXXXXXXXXVLKQGSCESKIASVRVLKSIAVDTESKLLIAEKEGLVSELLNLITPEKDPNLIENALSCLVAISTPKRNKSKLIHLGAVKVFSNLLTSPSNLCVSVTEKVLKLLETVSSTKEGRSEICEEPSCVAAIVNKVLKVSTVATEHAVTILWSVCYLFRDQKAQESVTKANGLTKILLLMQSNCTPQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme68955g00001 220 Gene3D - 36 219 IPR011989 -
Trme68955g00001 220 PANTHER WDSAM1 PROTEIN 36 218 IPR045185 GO:0061630
Trme68955g00001 220 SUPERFAMILY ARM repeat 41 215 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme68955g00001 Trme-Chr68955 169 828 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme68955g00001 39 219 U-box Gene Family AT5G64660 56.831 2.93e-53 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme68955g00001 - - cam:101496984 332.798